Anchorpoints

Gene id
AL6G33640
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G11110SPA1-related 2 (SPA2); FUNCTIONS IN: protein binding, signal transducer activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein kinase, catalytic domain (InterPro:IPR000719), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: SPA (suppressor of phyA-105) protein family (TAIR:AT2G46340.1); Has 34047 Blast hits to 20982 proteins in 883 species: Archae - 38; Bacteria - 5461; Metazoa - 12841; Fungi - 7307; Plants - 4015; Viruses - 10; Other Eukaryotes - 4375 (source: NCBI BLink). SPA1-related 2 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants.4+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G10220No description available.A08-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G05530No description available.Bvchr1.sca001+View
BV5G06430No description available.Bvchr5.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G01880No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00005G07150No description available.CM3.5_scaffold00005-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00122G00290No description available.supercontig_122-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G28830No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00009G01930No description available.scaffold00009-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G14210No description available.scaffold_4+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G04600Protein SPA1-RELATED 2 (similar to)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G43360No description available.Gm01-View
GM11G02110No description available.Gm11+View
GM05G37070No description available.Gm05+View
GM08G02490No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G10630No description available.Chr07-View
GR08G25260No description available.Chr08-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G036330No description available.chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G010030No description available.14+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G17730No description available.scaffold_2-View
PPE_005G12330No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G13710No description available.Chr03-View
PT01G09450No description available.Chr01+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30190G05070No description available.30190-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G081990WD-40 repeat (AHRD V1 *--- Q3M9A6_ANAVT)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G028390WD-repeat protein (AHRD V1 *--- Q7ND80_GLOVI); contains Interpro domain(s) IPR017986 WD40 repeat, regionchr08+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G28790No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G06310similar to AT4G11110|SPA2 (SPA1-RELATED 2)ch6-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G04300name=GSVIVG01019492001;chr2-View


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Gene id
Species
Description
Chromosome
Strand