Anchorpoints

Gene id
AL6G24200
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G24270encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium. Calcium-binding EF-hand family protein SALT OVERLY SENSITIVE 3 (SOS3); CONTAINS InterPro DOMAIN/s: Recoverin (InterPro:IPR001125), EF-HAND 2 (InterPro:IPR018249), Calcineurin B protein (InterPro:IPR015757), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: calcineurin B-like protein 8 (TAIR:AT1G64480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G25590No description available.A06-View
BR01G16570No description available.A01-View
BR02G37420No description available.A02+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G02040No description available.Bvchr3.sca003+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G10140No description available.Chr5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G00870No description available.supercontig_3-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G21360No description available.scaffold_6-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G03310No description available.scaffold_11-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G13420No description available.Gm06-View
GM04G41430No description available.Gm04+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G25580No description available.Chr08-View
GR07G01540No description available.Chr07-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD07G019830No description available.7+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G091440calcineurin B-like protein 4-1chr3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G29730No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT12G01510No description available.Chr12-View
PT03G14140No description available.Chr03-View
PT15G01310No description available.Chr15+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G051970Calcineurin B-like calcium binding protein (AHRD V1 **** B2ZYT8_VICFA)%3B contains Interpro domain(s) IPR015757 Calcineurin B proteinch06-View
SL03G083320Calcineurin B-like calcium binding protein (AHRD V1 **** B2ZYT8_VICFA)%3B contains Interpro domain(s) IPR018248 EF handch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G013280Calcineurin B-like calcium binding protein (AHRD V1 **** B2ZYT8_VICFA); contains Interpro domain(s) IPR015757 Calcineurin B proteinchr03+View
ST06G016090Calcineurin B-like calcium binding protein (AHRD V1 **** B2ZYT8_VICFA); contains Interpro domain(s) IPR015757 Calcineurin B proteinchr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G19900No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G23100similar to AT5G24270|SOS3 (SALT OVERLY SENSITIVE 3)ch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV16G09010name=GSVIVG01038549001;chr16+View


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Gene id
Species
Description
Chromosome
Strand