Anchorpoints

Gene id
AL6G20080
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G19790related to AP2 11 related to AP2 11 (RAP2.11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root hair, epidermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: cytokinin response factor 4 (TAIR:AT4G27950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G09760No description available.A02-View
BR10G15200No description available.A10+View
BR03G08570No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV4G11360No description available.Bvchr4.sca001-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G17670No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00123G00120No description available.scaffold00123+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G30090No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G37340Ethylene-responsive transcription factor RAP2-11 (probable)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G29011No description available.Gm05-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G000340No description available.11-View
MD03G000860No description available.3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G00470No description available.Chr01-View
PT03G22020No description available.Chr03+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30084G00090No description available.30084+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G20370No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G24610similar to AT5G19790|RAP2.11 (related to AP2 11)ch6-6+View


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Gene id
Species
Description
Chromosome
Strand