Anchorpoints

Gene id
AL6G18900
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G06430No description available.scaffold_3+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G06330RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G18760.1); Has 1679 Blast hits to 1517 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 662; Fungi - 120; Plants - 648; Viruses - 4; Other Eukaryotes - 245 (source: NCBI BLink). RING/U-box superfamily protein3+View
AT5G18760RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G06330.1); Has 1350 Blast hits to 1348 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 109; Plants - 630; Viruses - 4; Other Eukaryotes - 81 (source: NCBI BLink). RING/U-box superfamily protein5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G34250No description available.A02+View
BR02G09170No description available.A02-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G05260No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00047G02470No description available.CM3.5_scaffold00047-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00016G00970No description available.supercontig_16+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G16670No description available.scaffold_6-View
CRU_003G05530No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00011G02380No description available.scaffold00011+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G30040No description available.scaffold_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G11570E3 ubiquitin-protein ligase MARCH4 (MARCH-IV), Precursor (probable)LG4+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G10590No description available.Gm15-View
GM13G28480No description available.Gm13+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G18470No description available.Chr11+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09365G00090No description available.scaffold09365+View
ME01551G03090No description available.scaffold01551+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G020520zinc finger proteinchr2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G13600No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G19640No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29726G00830No description available.29726+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G067800E3 ubiquitin-protein ligase MARCH1 (AHRD V1 *--* MARH1_MOUSE)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech01-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G021880Zinc finger family protein (AHRD V1 **-- D7LYH2_ARALY); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-typechr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G27730No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G05240similar to AT3G06330|zinc finger (C3HC4-type RING finger) family proteinch3-1+View
TP6G25620similar to AT5G18760|zinc finger (C3HC4-type RING finger) family proteinch6-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G03650name=GSVIVG01017826001;chr5-View


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Gene id
Species
Description
Chromosome
Strand