Anchorpoints

Gene id
AL6G08750
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL8G30390No description available.scaffold_8+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G63780shoot apical meristem arrest 1 (SHA1); FUNCTIONS IN: zinc ion binding; INVOLVED IN: maintenance of shoot apical meristem identity, meristem development; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G08750.2); Has 328 Blast hits to 324 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 327; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein Encodes SHA1 (shoot apical meristem arrest), a putative E3 ligase (a RING finger protein) required for post-embryonic SAM maintenance. The mutant sha1-1 shows a primary SAM-deficient phenotype at the adult stage.5+View
AT5G08750RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G63780.1); Has 309 Blast hits to 307 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 307; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G21800No description available.A06+View
BR09G06600No description available.A09+View
BR02G39360No description available.A02+View
BR10G26330No description available.A10+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G23860No description available.scaffold_8+View
CRU_006G07540No description available.scaffold_6+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G41160No description available.scaffold_8-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G00500No description available.Gm08-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G094610RING/FYVE/PHD zinc finger proteinchr8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G07010No description available.Chr05-View
PT07G09890No description available.Chr07+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G34120similar to AT5G08750|zinc finger (C3HC4-type RING finger) family proteinch6-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G07420name=GSVIVG01022362001;chr7-View


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Description
Chromosome
Strand