Anchorpoints

Gene id
AL6G05000
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G11450No description available.scaffold_3+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G11020DRE/CRT-binding protein 2B DRE/CRT-binding protein 2B (DREB2B); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DRE-binding protein 2A (TAIR:AT5G05410.1); Has 5317 Blast hits to 5304 proteins in 255 species: Archae - 0; Bacteria - 10; Metazoa - 17; Fungi - 6; Plants - 5184; Viruses - 2; Other Eukaryotes - 98 (source: NCBI BLink). encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2B). The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A.3+View
AT5G05410DRE-binding protein 2A Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress?inducible genes. DRE-binding protein 2A (DREB2A); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DRE/CRT-binding protein 2B (TAIR:AT3G11020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View
AT2G38340Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G40340.1); Has 5061 Blast hits to 5054 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5051; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G24040No description available.A04-View
BR10G23780No description available.A10+View
BR03G01950No description available.A03+View
BR02G04070No description available.A02+View
BR01G38050No description available.A01-View
BR05G31500No description available.A05-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G59760No description available.Bvchr2_un.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G23830No description available.Chr5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00019G01230No description available.supercontig_19+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G04220No description available.scaffold_6+View
CRU_003G09870No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00021G00070No description available.scaffold00021+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G24690No description available.scaffold_7-View
EG0011G24810No description available.scaffold_11+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G30250Dehydration-responsive element-binding protein 2C (Protein DREB2C) (probable)LG7-View
FV7G29790Ethylene-responsive transcription factor ABI4 (ERF ABI4) (probable)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G06080No description available.Gm14+View
GM02G42960No description available.Gm02+View
GM18G43750No description available.Gm18-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD04G013230No description available.4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G24660No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G10420No description available.Chr06-View
PT10G18370No description available.Chr10+View
PT16G12610No description available.Chr16-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29729G00250No description available.29729-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G076370Ethylene-responsive transcription factor 13 (AHRD V1 *-*- ERF99_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch10+View
SL06G050520Ethylene-responsive transcription factor 1 (AHRD V1 *-*- ERF1_ORYSJ)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch06-View
SL05G052410Ethylene-responsive transcription factor 1 (AHRD V1 *-** ERF1_ORYSJ)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch05+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G025070Ethylene-responsive transcription factor 1 (AHRD V1 *-** ERF1_ORYSJ); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr05+View
ST06G014200Ethylene responsive transcription factor 12 (AHRD V1 *-*- C0J9I3_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr06-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G09350similar to AT3G11020|DREB2B (DRE/CRT-BINDING PROTEIN 2B)ch3-1+View
TP6G37420similar to AT5G05410|DREB2Ach6-6-View


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