Anchorpoints
- Gene id
- AL6G04990
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G14800 | No description available. | scaffold_4 | - | View |
AL4G27230 | No description available. | scaffold_4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G40370 | laccase 5 laccase 5 (LAC5); FUNCTIONS IN: laccase activity; INVOLVED IN: response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 10120 Blast hits to 8186 proteins in 1337 species: Archae - 37; Bacteria - 4008; Metazoa - 431; Fungi - 3685; Plants - 1575; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). putative laccase, a member of laccase family of genes (17 members in Arabidopsis). | 2 | - | View |
AT5G05390 | putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 12 laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | + | View |
AT2G30210 | laccase 3 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 3 (LAC3); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: hypocotyl, fruit, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 13 (TAIR:AT5G07130.1); Has 11124 Blast hits to 9161 proteins in 1586 species: Archae - 42; Bacteria - 5039; Metazoa - 506; Fungi - 3547; Plants - 1577; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). | 2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR04G24050 | No description available. | A04 | - | View |
BR02G04060 | No description available. | A02 | + | View |
BR10G23770 | No description available. | A10 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G59740 | No description available. | Bvchr2_un.sca001 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00019G01210 | No description available. | supercontig_19 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G11050 | No description available. | scaffold_4 | - | View |
CRU_004G21880 | No description available. | scaffold_4 | - | View |
CRU_006G04210 | No description available. | scaffold_6 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0007G24730 | No description available. | scaffold_7 | - | View |
EG0010G01470 | No description available. | scaffold_10 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G30410 | Laccase-5, Precursor (similar to) | LG7 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM14G06070 | No description available. | Gm14 | + | View |
GM11G35700 | No description available. | Gm11 | - | View |
GM02G42940 | No description available. | Gm02 | + | View |
GM14G37810 | No description available. | Gm14 | - | View |
GM18G02690 | No description available. | Gm18 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR11G29000 | No description available. | Chr11 | + | View |
GR10G19420 | No description available. | Chr10 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT5G083360 | laccase/diphenol oxidase family protein | chr5 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G61160 | Laccase-3 laccase precursor protein, putative, expressed | 1 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G24710 | No description available. | scaffold_2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G18350 | No description available. | Chr10 | + | View |
PT08G07370 | No description available. | Chr08 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29729G00270 | No description available. | 29729 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G050530 | Laccase (AHRD V1 ***- Q9ZP47_POPTR)%3B contains Interpro domain(s) IPR017761 Laccase | ch06 | - | View |
SL05G052340 | Laccase (AHRD V1 ***- Q9ZP47_POPTR)%3B contains Interpro domain(s) IPR017761 Laccase | ch05 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST05G025000 | Laccase (AHRD V1 ***- Q9ZP47_POPTR); contains Interpro domain(s) IPR017761 Laccase | chr05 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0010G00890 | No description available. | scaffold_10r | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G22690 | similar to AT2G40370|LAC5 (laccase 5) | ch4-6 | - | View |
TP6G37430 | similar to AT5G05390|LAC12 (laccase 12) | ch6-6 | - | View |
TP4G12800 | similar to AT2G30210|LAC3 (laccase 3) | ch4-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV13G09850 | name=GSVIVG01032744001; | chr13 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G28090 | L-ascorbate oxidase | 3 | - | View |
ZM08G32650 | No description available. | 8 | - | View |
ZM01G12650 | No description available. | 1 | + | View |