Anchorpoints

Gene id
AL6G04260
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G11020No description available.scaffold_3-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G04870calcium dependent protein kinase 1 calcium dependent protein kinase 1 (CPK1); FUNCTIONS IN: protein binding, calmodulin-dependent protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: peroxisome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.5-View
AT3G10660predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2 (CPK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 145304 Blast hits to 132515 proteins in 4265 species: Archae - 224; Bacteria - 17128; Metazoa - 53382; Fungi - 18632; Plants - 28672; Viruses - 609; Other Eukaryotes - 26657 (source: NCBI BLink). calmodulin-domain protein kinase cdpk isoform 23-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G01670No description available.A03-View
BR05G31800No description available.A05+View
BR10G26860No description available.A10+View
BR03G32190No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G32870No description available.Bvchr4_un.sca003+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G23060No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00040G01660No description available.CM3.5_scaffold00040+View
CM00016G06670No description available.CM3.5_scaffold00016+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00033G01090No description available.supercontig_33+View
CP00054G00230No description available.supercontig_54+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G03670No description available.scaffold_6-View
CRU_003G09470No description available.scaffold_3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G24480No description available.Chr10-View
PT08G01470No description available.Chr08+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G028120Calcium-dependent protein kinase 2 (AHRD V1 **** B4FZS4_MAIZE); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr05-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G37950similar to AT5G04870|CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1)ch6-6+View
TP3G08980similar to AT3G10660|CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2)ch3-1-View


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