Anchorpoints
- Gene id
- AL6G02280
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G09970 | No description available. | scaffold_3 | - | View |
AL8G26720 | No description available. | scaffold_8 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G09760 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G03180.2); Has 1083 Blast hits to 1078 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 334; Fungi - 71; Plants - 602; Viruses - 25; Other Eukaryotes - 49 (source: NCBI BLink). RING/U-box superfamily protein | 3 | - | View |
AT5G03180 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1). | 5 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G03200 | No description available. | A02 | - | View |
BR05G32510 | No description available. | A05 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV7G14150 | No description available. | Bvchr7.sca004 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G18370 | No description available. | Chr10 | + | View |
CL02G21250 | No description available. | Chr2 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00011G02600 | No description available. | CM3.5_scaffold00011 | - | View |
CM00004G04120 | No description available. | CM3.5_scaffold00004 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G01990 | No description available. | scaffold_6 | - | View |
CRU_008G20650 | No description available. | scaffold_8 | + | View |
CRU_003G08470 | No description available. | scaffold_3 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00014G02130 | No description available. | scaffold00014 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G20090 | No description available. | scaffold_2 | + | View |
EG0011G27290 | No description available. | scaffold_11 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G48600 | E3 ubiquitin-protein ligase MARCH7 (MARCH-VII) (probable) | LG6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM13G40150 | No description available. | Gm13 | - | View |
GM10G05910 | No description available. | Gm10 | - | View |
GM19G36490 | No description available. | Gm19 | - | View |
GM03G33750 | No description available. | Gm03 | - | View |
GM13G20250 | No description available. | Gm13 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G24860 | No description available. | Chr02 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ5G010740 | No description available. | chr5 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G011090 | No description available. | 12 | + | View |
MD04G007360 | No description available. | 4 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME02960G00630 | No description available. | scaffold02960 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G064710 | RING/U-box protein | chr1 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G24630 | No description available. | scaffold_6 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G12900 | No description available. | Chr06 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30078G01340 | No description available. | 30078 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G007680 | Zinc finger family protein (AHRD V1 **-- D7MTV5_ARALY)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-type | ch09 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST09G007300 | Zinc finger family protein (AHRD V1 **-- D7L8C4_ARALY); contains Interpro domain(s) IPR011016 Zinc finger, RING-CH-type | chr09 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G05550 | No description available. | scaffold_5 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G39540 | similar to AT5G03180|zinc finger (C3HC4-type RING finger) family protein | ch6-6 | + | View |
TP6G22150 | similar to AT5G60580|zinc finger (C3HC4-type RING finger) family protein | ch6-6 | + | View |
TP3G08100 | similar to AT3G09760|zinc finger (C3HC4-type RING finger) family protein | ch3-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G02780 | name=GSVIVG01025673001; | chr8 | + | View |