Anchorpoints
- Gene id
- AL5G34120
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G63030 | methyl-CPG-binding domain 4 (MBD4); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 1 (TAIR:AT4G22745.1); Has 159 Blast hits to 159 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 0; Plants - 112; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). methyl-CPG-binding domain 4 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G41890 | No description available. | A09 | + | View |
BR04G00230 | No description available. | A04 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G06250 | No description available. | Chr9 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00026G01960 | No description available. | CM3.5_scaffold00026 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_005G28220 | No description available. | scaffold_5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM10G02860 | No description available. | Gm10 | + | View |
GM02G16930 | No description available. | Gm02 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD03G023420 | No description available. | 3 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME11998G01430 | No description available. | scaffold11998 | - | View |
ME04457G01480 | No description available. | scaffold04457 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT14G13710 | No description available. | Chr14 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G034890 | Methyl-CpG-binding domain 4 (AHRD V1 **** D7LTC3_ARALY); contains Interpro domain(s) IPR001739 Methyl-CpG DNA binding | chr06 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G29940 | similar to AT4G22745|MBD1 | ch4-6 | + | View |
TP5G00490 | similar to AT3G63030|MBD4 | ch5-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G04330 | name=GSVIVG01011058001; | chr7 | - | View |