Anchorpoints

Gene id
AL5G31280
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL4G32950No description available.scaffold_4+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G60570expansin B5 (EXPB5); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 1985 Blast hits to 1982 proteins in 144 species: Archae - 0; Bacteria - 10; Metazoa - 1; Fungi - 27; Plants - 1928; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). expansin B5 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)3+View
AT2G45110expansin B4 expansin B4 (EXPB4); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: beta expansin 6 (TAIR:AT1G65681.1); Has 2182 Blast hits to 2179 proteins in 176 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 32; Plants - 2098; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G01390No description available.A04-View
BR07G16620No description available.A07+View
BR05G04790No description available.A05+View
BR03G22180No description available.A03+View
BR03G43660No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G64940No description available.Bvchr1_un.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G00350No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G00380No description available.CM3.5_scaffold00006-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00049G01380No description available.supercontig_49+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G26710No description available.scaffold_4+View
CRU_005G25900No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G01240No description available.scaffold00001+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G13240No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G12150Expansin-B18, Precursor (similar to)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM03G03980No description available.Gm03-View
GM11G17160No description available.Gm11-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G10670No description available.Chr08-View
GR04G16420No description available.Chr04-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04450G00210No description available.scaffold04450-View
ME08265G04870No description available.scaffold08265+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G46630expansin precursor, putative, expressed Expansin-B154+View
OS02G44106expansin precursor, putative, expressed Putative expansin-B142+View
OS10G40700Expansin-B6 expansin precursor, putative, expressed10-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G12590No description available.scaffold_2+View
PPE_002G13390No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G06630No description available.Chr14-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G00720No description available.30174+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G018500Expansin protein (AHRD V1 ***- Q14F61_WHEAT)%3B contains Interpro domain(s) IPR014734 Pollen allergen%2C N-terminalch10-View
SL01G090810Expansin protein (AHRD V1 ***- Q14F61_WHEAT)%3B contains Interpro domain(s) IPR007112 Expansin 45%2C endoglucanase-likech01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G029960Expansin protein (AHRD V1 ***- Q14F61_WHEAT); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminalchr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G38050No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G02660similar to AT3G60570|ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5)ch5-1-View
TP4G27160similar to AT2G45110|ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)ch4-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G00420name=GSVIVG01018168001;chr15-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G18160LOC5424969-View


Download

Gene id
Species
Description
Chromosome
Strand