Anchorpoints

Gene id
AL5G25190
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL4G25790No description available.scaffold_4-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G39350ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G55090.1); Has 383683 Blast hits to 350637 proteins in 4113 species: Archae - 6942; Bacteria - 305769; Metazoa - 8575; Fungi - 6049; Plants - 5390; Viruses - 9; Other Eukaryotes - 50949 (source: NCBI BLink). ABC-2 type transporter family protein2-View
AT3G55090ABC-2 type transporter family protein ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G39350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G14490No description available.A07-View
BR04G04260No description available.A04+View
BR09G36090No description available.A09-View
BR05G06370No description available.A05+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G18750No description available.Chr10-View
CL09G20620No description available.Chr9-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G02180No description available.CM3.5_scaffold00011+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G02930No description available.supercontig_1-View
CP00114G00170No description available.supercontig_114+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G20450No description available.scaffold_5-View
CRU_004G20690No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00024G01460No description available.scaffold00024+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G21800No description available.scaffold_7+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G14190ABC transporter G family member 20 (ABC transporter ABCG.20) (similar to)LG6+View
FV7G25220ABC transporter G family member 6 (ABC transporter ABCG.6) (similar to)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G35970No description available.Gm19+View
GM03G33250No description available.Gm03+View
GM20G38610No description available.Gm20+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G25260No description available.Chr02-View
GR12G09170No description available.Chr12-View
GR12G06720No description available.Chr12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04651G00010No description available.scaffold04651+View
ME12004G00280No description available.scaffold12004+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G115790white-brown-complex ABC transporter family proteinchr1+View
MT7G100120white-brown-complex ABC transporter family proteinchr7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G17350white-brown complex homolog protein, putative, expressed3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G25410No description available.scaffold_6-View
PPE_002G21700No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G04790No description available.Chr08-View
PT10G21340No description available.Chr10+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29805G00570No description available.29805-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G005970ABC transporter G family member 2 (AHRD V1 ***- AB2G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporterch09+View
SL05G054890ABC transporter G family member 1 (AHRD V1 **** AB1G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporterch05+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G009760ABC transporter G family member 1 (AHRD V1 ***- AB1G_ARATH); contains Interpro domain(s) IPR013525 ABC-2 type transporterchr04+View
ST09G006020ABC transporter G family member 20 (AHRD V1 **** AB20G_ARATH); contains Interpro domain(s) IPR013525 ABC-2 type transporterchr09+View
ST05G027960ABC transporter G family member 1 (AHRD V1 **** AB1G_ARATH); contains Interpro domain(s) IPR013525 ABC-2 type transporterchr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0010G05890No description available.scaffold_10r+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G21660similar to AT2G39350|ABC transporter family proteinch4-6-View
TP5G07290similar to AT3G55130|ATWBC19 (White-Brown Complex homolog 19)ch5-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G02050name=GSVIVG01025582001;chr8+View
VV13G08790name=GSVIVG01032625001;chr13-View


Download

Gene id
Species
Description
Chromosome
Strand