Anchorpoints

Gene id
AL5G24390
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G54320WRINKLED 1 (WRI1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G79700.2); Has 9494 Blast hits to 5549 proteins in 332 species: Archae - 18; Bacteria - 68; Metazoa - 1307; Fungi - 140; Plants - 7359; Viruses - 82; Other Eukaryotes - 520 (source: NCBI BLink). WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. Integrase-type DNA-binding superfamily protein3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G14190No description available.A07+View
BR09G35340No description available.A09+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G19680No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G08070similar to AT3G54320|WRI1 (WRINKLED 1)ch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G03790name=GSVIVG01016352001;chr13+View


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Gene id
Species
Description
Chromosome
Strand