Anchorpoints

Gene id
AL5G23490
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL4G23010No description available.scaffold_4-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G53510ABC-2 type transporter family protein ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Pigment precursor permease (InterPro:IPR005284), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G37360.1); Has 392871 Blast hits to 356829 proteins in 4146 species: Archae - 6979; Bacteria - 312762; Metazoa - 8946; Fungi - 6247; Plants - 5690; Viruses - 12; Other Eukaryotes - 52235 (source: NCBI BLink).3-View
AT2G37360ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: petal, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Pigment precursor permease (InterPro:IPR005284), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G53510.1); Has 392085 Blast hits to 356271 proteins in 4132 species: Archae - 6993; Bacteria - 312114; Metazoa - 8789; Fungi - 6117; Plants - 5602; Viruses - 12; Other Eukaryotes - 52458 (source: NCBI BLink). ABC-2 type transporter family protein2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G22250No description available.A04-View
BR09G34740No description available.A09-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G18750No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G02180No description available.CM3.5_scaffold00011+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00114G00170No description available.supercontig_114+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G18670No description available.scaffold_4-View
CRU_005G18880No description available.scaffold_5-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G49140ABC transporter G family member 28 (ABC transporter ABCG.28) (similar to)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G35970No description available.Gm19+View
GM03G33250No description available.Gm03+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G37490No description available.Chr07-View
GR02G25260No description available.Chr02-View
GR13G02390No description available.Chr13+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G063480No description available.chr1+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G100120white-brown-complex ABC transporter family proteinchr7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G17350white-brown complex homolog protein, putative, expressed3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G24340No description available.scaffold_6+View
PPE_006G25410No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G21510No description available.Chr06+View
PT06G12610No description available.Chr06+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30078G01020No description available.30078+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G069710ABC transporter G family member 3 (AHRD V1 ***- AB3G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporterch11-View
SL05G054890ABC transporter G family member 1 (AHRD V1 **** AB1G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporterch05+View
SL09G008000ABC transporter G family member 28 (AHRD V1 **** AB28G_ARATH)%3B contains Interpro domain(s) IPR003439 ABC transporter-likech09-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G027960ABC transporter G family member 1 (AHRD V1 **** AB1G_ARATH); contains Interpro domain(s) IPR013525 ABC-2 type transporterchr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G04660No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G08820similar to AT3G53510|ABC transporter family proteinch5-1+View
TP4G19670similar to AT2G37360|ABC transporter family proteinch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G02050name=GSVIVG01025582001;chr8+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G11800ATPase, coupled to transmembrane movement of substances1+View
ZM08G32290No description available.8-View


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Chromosome
Strand