Anchorpoints
- Gene id
- AL5G17300
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G63260 | Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G48440.1). Zinc finger C-x8-C-x5-C-x3-H type family protein | 5 | + | View |
AT3G48440 | Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G63260.1); Has 1758 Blast hits to 1034 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 243; Plants - 962; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). Zinc finger C-x8-C-x5-C-x3-H type family protein | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR06G17020 | No description available. | A06 | - | View |
BR06G21380 | No description available. | A06 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL03G03290 | No description available. | Chr3 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00001G04280 | No description available. | CM3.5_scaffold00001 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00004G00510 | No description available. | supercontig_4 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G23350 | No description available. | scaffold_8 | + | View |
CRU_005G13710 | No description available. | scaffold_5 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00020G00240 | No description available. | scaffold00020 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G01270 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G09520 | Zinc finger CCCH domain-containing protein 67 (AtC3H67) (similar to) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM06G18253 | No description available. | Gm06 | - | View |
GM04G36670 | No description available. | Gm04 | + | View |
GM17G13580 | No description available. | Gm17 | + | View |
GM05G02920 | No description available. | Gm05 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G20440 | No description available. | Chr08 | + | View |
GR01G06180 | No description available. | Chr01 | - | View |
GR07G04160 | No description available. | Chr07 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ4G026450 | No description available. | chr4 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD14G016060 | No description available. | 14 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME10899G00190 | No description available. | scaffold10899 | + | View |
ME12794G00180 | No description available. | scaffold12794 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G104260 | zinc finger C-x8-C-x5-C-x3-H type family protein | chr4 | - | View |
MT3G075190 | zinc finger CCCH domain protein | chr3 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G16500 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT12G09250 | No description available. | Chr12 | + | View |
PT15G08910 | No description available. | Chr15 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30147G04870 | No description available. | 30147 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G071860 | Zinc finger CCCH domain-containing protein 67 (AHRD V1 *-*- C3H67_ARATH)%3B contains Interpro domain(s) IPR000571 Zinc finger%2C CCCH-type | ch06 | + | View |
SL03G111580 | Zinc finger CCCH domain-containing protein 43 (AHRD V1 ***- C3H43_ARATH)%3B contains Interpro domain(s) IPR000571 Zinc finger%2C CCCH-type | ch03 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G029190 | Zinc finger CCCH domain-containing protein 67 (AHRD V1 *-*- C3H67_ARATH); contains Interpro domain(s) IPR000571 Zinc finger, CCCH-type | chr06 | - | View |
ST03G023490 | Zinc finger CCCH domain-containing protein 43 (AHRD V1 ***- C3H43_ARATH); contains Interpro domain(s) IPR000571 Zinc finger, CCCH-type | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G12460 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G13590 | similar to AT3G48440|zinc finger (CCCH-type) family protein | ch5-1 | - | View |
TP2G26380 | similar to AT5G63260|zinc finger (CCCH-type) family protein | ch2-4 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G00290 | name=GSVIVG01007563001; | chr17 | + | View |