Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
AT3G47470 | Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins. light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). light-harvesting chlorophyll-protein complex I subunit A4 | 3 | - | View |
Brassica rapa
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
BR06G17870 | No description available. | A06 | + | View |
Citrullus lanatus
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
CL04G11970 | No description available. | Chr4 | + | View |
Cucumis melo
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
CM00030G01020 | No description available. | CM3.5_scaffold00030 | - | View |
CM00001G00810 | No description available. | CM3.5_scaffold00001 | - | View |
Carica papaya
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
CP00111G00180 | No description available. | supercontig_111 | + | View |
Capsella rubella
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
CRU_005G12720 | No description available. | scaffold_5 | - | View |
Citrus sinensis
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
CS00111G00310 | No description available. | scaffold00111 | - | View |
Eucalyptus grandis
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
EG0002G04490 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
FV5G13100 | Chlorophyll a-b binding protein P4, chloroplastic, Precursor (putative) | LG5 | + | View |
Gossypium raimondii
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
GR08G19400 | No description available. | Chr08 | + | View |
Malus domestica
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
MD14G019280 | No description available. | 14 | - | View |
Manihot esculenta
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
ME08359G02220 | No description available. | scaffold08359 | + | View |
Prunus persica
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
PPE_005G19990 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
PT15G06220 | No description available. | Chr15 | + | View |
Solanum lycopersicum
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
SL03G115900 | Chlorophyll a-b binding protein P4%2C chloroplastic (AHRD V1 ***- CB24_PEA)%3B contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein | ch03 | + | View |
SL06G069730 | Chlorophyll a-b binding protein 4%2C chloroplastic (AHRD V1 ***- CA4_ARATH)%3B contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein | ch06 | + | View |
Solanum tuberosum
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
ST03G029380 | Chlorophyll a-b binding protein P4, chloroplastic (AHRD V1 ***- CB24_PEA); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein | chr03 | + | View |
ST06G026740 | Chlorophyll a-b binding protein 4, chloroplastic (AHRD V1 ***- CA4_ARATH); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein | chr06 | + | View |
Theobroma cacao
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
TC0003G09340 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
TP5G14410 | similar to AT3G47470|LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4) | ch5-1 | + | View |
TP2G25610 | similar to AT3G47470|LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4) | ch2-4 | - | View |
Vitis vinifera
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
VV17G03560 | name=GSVIVG01007988001; | chr17 | - | View |