Anchorpoints

Gene id
AL5G16200
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G47470Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins. light-harvesting chlorophyll-protein complex I subunit A4 (LHCA4); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to karrikin, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 2 (TAIR:AT3G61470.1); Has 2336 Blast hits to 2249 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1967; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink). light-harvesting chlorophyll-protein complex I subunit A43-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G17870No description available.A06+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G11970No description available.Chr4+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00030G01020No description available.CM3.5_scaffold00030-View
CM00001G00810No description available.CM3.5_scaffold00001-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00111G00180No description available.supercontig_111+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G12720No description available.scaffold_5-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00111G00310No description available.scaffold00111-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G04490No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G13100Chlorophyll a-b binding protein P4, chloroplastic, Precursor (putative)LG5+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G19400No description available.Chr08+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G019280No description available.14-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08359G02220No description available.scaffold08359+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G19990No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G06220No description available.Chr15+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G115900Chlorophyll a-b binding protein P4%2C chloroplastic (AHRD V1 ***- CB24_PEA)%3B contains Interpro domain(s) IPR001344 Chlorophyll A-B binding proteinch03+View
SL06G069730Chlorophyll a-b binding protein 4%2C chloroplastic (AHRD V1 ***- CA4_ARATH)%3B contains Interpro domain(s) IPR001344 Chlorophyll A-B binding proteinch06+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G029380Chlorophyll a-b binding protein P4, chloroplastic (AHRD V1 ***- CB24_PEA); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding proteinchr03+View
ST06G026740Chlorophyll a-b binding protein 4, chloroplastic (AHRD V1 ***- CA4_ARATH); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding proteinchr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G09340No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G14410similar to AT3G47470|LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)ch5-1+View
TP2G25610similar to AT3G47470|LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)ch2-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G03560name=GSVIVG01007988001;chr17-View


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Gene id
Species
Description
Chromosome
Strand