Anchorpoints

Gene id
AL5G14400
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G59780Encodes a putative transcription factor (MYB59). myb domain protein 59 myb domain protein 59 (MYB59); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to cadmium ion, regulation of transcription, DNA-dependent, response to chitin, response to salicylic acid stimulus; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 48 (TAIR:AT3G46130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View
AT3G46130Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons. myb domain protein 48 (MYB48); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to salicylic acid stimulus, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 59 (TAIR:AT5G59780.3); Has 8993 Blast hits to 8283 proteins in 477 species: Archae - 0; Bacteria - 0; Metazoa - 750; Fungi - 483; Plants - 5952; Viruses - 3; Other Eukaryotes - 1805 (source: NCBI BLink). myb domain protein 483+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G18650No description available.A06-View
BR10G12500No description available.A10-View
BR03G10300No description available.A03+View
BR02G12020No description available.A02+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G20630No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00044G02370No description available.CM3.5_scaffold00044+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00190G00340No description available.supercontig_190+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G11260No description available.scaffold_5+View
CRU_008G19880No description available.scaffold_8-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G00960No description available.scaffold00014+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G17950No description available.scaffold_10+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G15180No description available.Gm11+View
GM15G04620No description available.Gm15+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G008560No description available.11+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03750G00020No description available.scaffold03750+View
ME00506G00480No description available.scaffold00506-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G08330No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G23550No description available.Chr01-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G005310MYB transcription factor (AHRD V1 *-** Q9C9G7_ARATH)%3B contains Interpro domain(s) IPR015495 Myb transcription factorch06-View
SL11G073120MYB transcription factor (AHRD V1 *-*- Q56UT4_ORYSJ)%3B contains Interpro domain(s) IPR015495 Myb transcription factorch11+View
SL06G075660MYB transcription factor (AHRD V1 *-** Q9C9G7_ARATH)%3B contains Interpro domain(s) IPR015495 Myb transcription factorch06-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G030040MYB transcription factor (AHRD V1 *-** Q56UT4_ORYSJ); contains Interpro domain(s) IPR015495 Myb transcription factorchr11+View
ST06G031560MYB transcription factor (AHRD V1 *-** Q9C9G7_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factorchr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G32230No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G15520similar to AT3G46130|MYB111 (MYB DOMAIN PROTEIN 111)ch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G04140name=GSVIVG01025034001;chr6-View


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Gene id
Species
Description
Chromosome
Strand