Anchorpoints

Gene id
AL5G13780
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL8G00090No description available.scaffold_8-View
AL8G26410No description available.scaffold_8+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G60170RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA recognition, domain 1 (InterPro:IPR003954); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1). RNA binding (RRM/RBD/RNP motifs) family protein5+View
AT3G45630RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). RNA binding (RRM/RBD/RNP motifs) family protein3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G18850No description available.A06+View
BR03G10130No description available.A03-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G20900No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00082G00480No description available.CM3.5_scaffold00082+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G10770No description available.scaffold_5-View
CRU_008G20300No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G01550No description available.scaffold00014-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G19720No description available.scaffold_2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G40460No description available.Gm13+View
GM12G07791No description available.Gm12+View
GM11G15670No description available.Gm11-View
GM15G04950No description available.Gm15-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G008080No description available.3-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03750G00500No description available.scaffold03750-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G093100RNA-binding (RRM/RBD/RNP motif) family proteinchr2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G25050No description available.scaffold_6+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G072590CCR4-NOT transcription complex subunit 4 (AHRD V1 *--- Q498M7_RAT)%3B contains Interpro domain(s) IPR003954 RNA recognition%2C region 1ch11+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G33010No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G15830similar to AT3G45630|RNA recognition motif (RRM)-containing proteinch5-1+View


Download

Gene id
Species
Description
Chromosome
Strand