Anchorpoints

Gene id
AL5G08880
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G69330RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G29270.2); Has 288 Blast hits to 287 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). RING/U-box superfamily protein1-View
AT3G29270RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G69330.1); Has 253 Blast hits to 253 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 2; Plants - 132; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). RING/U-box superfamily protein3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G31670No description available.A02-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G00960No description available.supercontig_1+View
CP00014G01430No description available.supercontig_14+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G07390No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00015G02190No description available.scaffold00015-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G16660No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G43290RING finger protein 208 (probable)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G05870No description available.Gm13+View
GM01G06800No description available.Gm01+View
GM19G03380No description available.Gm19+View
GM18G49900No description available.Gm18+View
GM08G26380No description available.Gm08+View
GM02G12720No description available.Gm02+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR12G05040No description available.Chr12-View
GR07G08120No description available.Chr07+View
GR06G01230No description available.Chr06-View
GR13G09160No description available.Chr13+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G003210No description available.16-View
MD09G004370No description available.9+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08359G01900No description available.scaffold08359-View
ME06609G00500No description available.scaffold06609-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT6G013720zinc finger C C3HC4 type (RING finger) proteinchr6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G23860No description available.scaffold_3-View
PPE_001G29410No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G09000No description available.Chr17+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G012560RING zinc finger protein-like (AHRD V1 **-- Q9LHJ7_ARATH)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-typech05-View
SL02G088570RING zinc finger protein-like (AHRD V1 ***- Q9LHJ7_ARATH)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-typech02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G034310RING zinc finger protein-like (AHRD V1 ***- B6U8G9_MAIZE); contains Interpro domain(s) IPR001841 Zinc finger, RING-typechr02-View
ST05G005490RING zinc finger protein-like (AHRD V1 **-- B6U8G9_MAIZE); contains Interpro domain(s) IPR001841 Zinc finger, RING-typechr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G09480No description available.scaffold_4+View
TC0002G33410No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G17850similar to AT3G29270|ubiquitin-protein ligasech2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G03120name=GSVIVG01007932001;chr17+View
VV14G02800name=GSVIVG01011489001;chr14+View


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Gene id
Species
Description
Chromosome
Strand