Anchorpoints

Gene id
AL5G04010
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G18530EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G25600.1); Has 21367 Blast hits to 15094 proteins in 1525 species: Archae - 2; Bacteria - 175; Metazoa - 8057; Fungi - 4921; Plants - 4996; Viruses - 2; Other Eukaryotes - 3214 (source: NCBI BLink). EF hand calcium-binding protein family1+View
AT3G25600Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family (TAIR:AT1G18530.1); Has 23107 Blast hits to 15210 proteins in 1505 species: Archae - 1; Bacteria - 136; Metazoa - 8522; Fungi - 5826; Plants - 5264; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink). Calcium-binding EF-hand family protein3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G34150No description available.A06-View
BR09G20950No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G20990No description available.Bvchr6.sca007+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G24280No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G05290No description available.CM3.5_scaffold00016+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00013G00720No description available.supercontig_13-View
CP00001G02400No description available.supercontig_1-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G03100No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00019G01040No description available.scaffold00019-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G18240No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G11050Probable calcium-binding protein CML15 (similar to)LG5-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G18860No description available.Chr08-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G017410No description available.6+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06656G00330No description available.scaffold06656-View
ME08359G00740No description available.scaffold08359-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G21710No description available.scaffold_5+View
PPE_001G31210No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G13280No description available.Chr10-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30138G00070No description available.30138-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G11790No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G14880similar to AT3G25600|calcium ion bindingch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G08660name=GSVIVG01012006001;chr1+View


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Gene id
Species
Description
Chromosome
Strand