Anchorpoints

Gene id
AL5G01740
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G15190No description available.scaffold_1-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G02540homeobox protein 21 (HB21); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 31 (TAIR:AT1G14440.2); Has 496 Blast hits to 486 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 476; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). homeobox protein 21 Zinc finger homeobox protein. Expressed in vascular tissue. In a yeast one hybrid system was not able to transactivate a reporter gene.2+View
AT1G14440homeobox protein 31 homeobox protein 31 (HB31); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G02540.1); Has 602 Blast hits to 562 proteins in 67 species: Archae - 0; Bacteria - 10; Metazoa - 45; Fungi - 3; Plants - 505; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G30620No description available.A02-View
BR06G09970No description available.A06-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00173G00050No description available.supercontig_173+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G13510No description available.scaffold_1-View
CRU_005G01430No description available.scaffold_5+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G00510No description available.scaffold_7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G00590No description available.Gm17-View
GM07G40190No description available.Gm07+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09151G00240No description available.scaffold09151-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G134580homeobox domain C ZF-HD class proteinchr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G53060No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G22960No description available.Chr04-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G102980Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch01+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G13770similar to AT2G02540|ATHB21 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 21)ch2-4+View
TP1G12810similar to AT1G14440|AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31)ch1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G06360name=GSVIVG01023137001;chr12-View


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Description
Chromosome
Strand