Anchorpoints
- Gene id
- AL4G16110
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G03690 | No description available. | scaffold_1 | + | View |
AL1G05680 | No description available. | scaffold_1 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G04370 | Ethylene-responsive element binding factor 14 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Ethylene-responsive element binding factor 14 (ERF14); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 6105 Blast hits to 5744 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6091; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink). | 1 | + | View |
AT1G06160 | octadecanoid-responsive Arabidopsis AP2/ERF 59 (ORA59); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 6527 Blast hits to 6261 proteins in 388 species: Archae - 0; Bacteria - 36; Metazoa - 435; Fungi - 42; Plants - 5810; Viruses - 4; Other Eukaryotes - 200 (source: NCBI BLink). encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. octadecanoid-responsive Arabidopsis AP2/ERF 59 | 1 | + | View |
AT2G31230 | encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ethylene-responsive element binding factor 15 ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink). | 2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G15650 | No description available. | A03 | - | View |
BR10G03400 | No description available. | A10 | - | View |
BR10G01730 | No description available. | A10 | - | View |
BR04G18500 | No description available. | A04 | - | View |
BR09G52750 | No description available. | A09 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV3G09630 | No description available. | Bvchr3.sca001 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL02G17700 | No description available. | Chr2 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00050G00270 | No description available. | supercontig_50 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G12180 | No description available. | scaffold_4 | - | View |
CRU_001G05180 | No description available. | scaffold_1 | + | View |
CRU_001G03260 | No description available. | scaffold_1 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00022G00010 | No description available. | scaffold00022 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G27530 | No description available. | scaffold_11 | - | View |
EG0005G03420 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV7G13170 | Ethylene-responsive transcription factor 13 (AtERF13) (probable) | LG7 | - | View |
FV4G00120 | Ethylene-responsive transcription factor 14 (AtERF14) (similar to) | LG4 | + | View |
FV2G08990 | Ethylene-responsive transcription factor ERF098 (similar to) | LG2 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM10G04160 | No description available. | Gm10 | + | View |
GM19G34650 | No description available. | Gm19 | + | View |
GM18G48721 | No description available. | Gm18 | + | View |
GM13G18330 | No description available. | Gm13 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G10840 | No description available. | Chr08 | - | View |
GR04G16570 | No description available. | Chr04 | - | View |
GR01G25240 | No description available. | Chr01 | + | View |
GR01G17660 | No description available. | Chr01 | + | View |
GR04G22080 | No description available. | Chr04 | + | View |
GR07G14570 | No description available. | Chr07 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ5G020390 | No description available. | chr5 | + | View |
LJ6G000390 | No description available. | chr6 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD10G022960 | No description available. | 10 | - | View |
MD10G014570 | No description available. | 10 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME09880G00210 | No description available. | scaffold09880 | + | View |
ME11581G00910 | No description available. | scaffold11581 | - | View |
ME06715G00100 | No description available. | scaffold06715 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT7G081795 | AP2-domain DNA-binding protein | chr7 | + | View |
MT7G096700 | AP2 domain class transcription factor | chr7 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G43790 | ethylene-responsive transcription factor, putative, expressed | 2 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_008G23860 | No description available. | scaffold_8 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT14G04660 | No description available. | Chr14 | + | View |
PT02G03900 | No description available. | Chr02 | - | View |
PT05G22310 | No description available. | Chr05 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29584G00010 | No description available. | 29584 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G090300 | Ethylene responsive transcription factor 1b (AHRD V1 *-*- C0J9I8_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch01 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G25730 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G03180 | similar to AT1G04370|ATERF14 (Ethylene-responsive element binding factor 14) | ch1-1 | + | View |
TP4G13720 | similar to AT2G31230|ATERF15 (Ethylene-responsive element binding factor 15) | ch4-6 | - | View |
TP1G04970 | similar to AT1G06160|ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV15G01110 | name=GSVIVG01018272001; | chr15 | + | View |
VV07G10790 | name=GSVIVG01028312001; | chr7 | + | View |