Anchorpoints

Gene id
AL4G16110
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G03690No description available.scaffold_1+View
AL1G05680No description available.scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G04370Ethylene-responsive element binding factor 14 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Ethylene-responsive element binding factor 14 (ERF14); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 6105 Blast hits to 5744 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6091; Viruses - 2; Other Eukaryotes - 12 (source: NCBI BLink).1+View
AT1G06160octadecanoid-responsive Arabidopsis AP2/ERF 59 (ORA59); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding factor 15 (TAIR:AT2G31230.1); Has 6527 Blast hits to 6261 proteins in 388 species: Archae - 0; Bacteria - 36; Metazoa - 435; Fungi - 42; Plants - 5810; Viruses - 4; Other Eukaryotes - 200 (source: NCBI BLink). encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. octadecanoid-responsive Arabidopsis AP2/ERF 591+View
AT2G31230encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ethylene-responsive element binding factor 15 ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G15650No description available.A03-View
BR10G03400No description available.A10-View
BR10G01730No description available.A10-View
BR04G18500No description available.A04-View
BR09G52750No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G09630No description available.Bvchr3.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G17700No description available.Chr2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00050G00270No description available.supercontig_50+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G12180No description available.scaffold_4-View
CRU_001G05180No description available.scaffold_1+View
CRU_001G03260No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00022G00010No description available.scaffold00022-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G27530No description available.scaffold_11-View
EG0005G03420No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G13170Ethylene-responsive transcription factor 13 (AtERF13) (probable)LG7-View
FV4G00120Ethylene-responsive transcription factor 14 (AtERF14) (similar to)LG4+View
FV2G08990Ethylene-responsive transcription factor ERF098 (similar to)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G04160No description available.Gm10+View
GM19G34650No description available.Gm19+View
GM18G48721No description available.Gm18+View
GM13G18330No description available.Gm13+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G10840No description available.Chr08-View
GR04G16570No description available.Chr04-View
GR01G25240No description available.Chr01+View
GR01G17660No description available.Chr01+View
GR04G22080No description available.Chr04+View
GR07G14570No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G020390No description available.chr5+View
LJ6G000390No description available.chr6-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD10G022960No description available.10-View
MD10G014570No description available.10-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09880G00210No description available.scaffold09880+View
ME11581G00910No description available.scaffold11581-View
ME06715G00100No description available.scaffold06715-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G081795AP2-domain DNA-binding proteinchr7+View
MT7G096700AP2 domain class transcription factorchr7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G43790ethylene-responsive transcription factor, putative, expressed2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G23860No description available.scaffold_8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G04660No description available.Chr14+View
PT02G03900No description available.Chr02-View
PT05G22310No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29584G00010No description available.29584-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G090300Ethylene responsive transcription factor 1b (AHRD V1 *-*- C0J9I8_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G25730No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G03180similar to AT1G04370|ATERF14 (Ethylene-responsive element binding factor 14)ch1-1+View
TP4G13720similar to AT2G31230|ATERF15 (Ethylene-responsive element binding factor 15)ch4-6-View
TP1G04970similar to AT1G06160|ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G01110name=GSVIVG01018272001;chr15+View
VV07G10790name=GSVIVG01028312001;chr7+View


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Gene id
Species
Description
Chromosome
Strand