Anchorpoints

Gene id
AL4G13650
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G29130putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydration laccase 2 (LAC2); FUNCTIONS IN: laccase activity; INVOLVED IN: response to water deprivation; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 17 (TAIR:AT5G60020.1); Has 9820 Blast hits to 8133 proteins in 1393 species: Archae - 28; Bacteria - 3936; Metazoa - 505; Fungi - 3408; Plants - 1575; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). laccase 22-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G14220No description available.A05+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G06220No description available.Bvchr7.sca021+View
BV2G05560No description available.Bvchr2.sca001-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G01700No description available.CM3.5_scaffold00011+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G02510No description available.supercontig_26+View
CP00081G01180No description available.supercontig_81+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G09920No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G00150No description available.scaffold00014+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G18460No description available.scaffold_2+View
EG0011G26140No description available.scaffold_11+View
EG0001G10410No description available.scaffold_1+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G12720Laccase-4, Precursor (putative)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G14600No description available.Gm11+View
GM13G41310No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G26320No description available.Chr13+View
GR03G12950No description available.Chr03+View
GR02G25710No description available.Chr02-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G045310No description available.chr3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07991G00790No description available.scaffold07991-View
ME06916G00430No description available.scaffold06916+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G064530laccase/diphenol oxidase family proteinchr4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G26520No description available.scaffold_6+View
PPE_006G07110No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G03450No description available.Chr09-View
PT06G08710No description available.Chr06+View
PT01G24320No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29751G01170No description available.29751+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G076330Laccase (AHRD V1 **** O24044_LIRTU)%3B contains Interpro domain(s) IPR017761 Laccasech06-View
SL09G010990Laccase (AHRD V1 ***- O24044_LIRTU)%3B contains Interpro domain(s) IPR017761 Laccasech09+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G032140Laccase (AHRD V1 **** Q9ZQW2_POPTR); contains Interpro domain(s) IPR017761 Laccasechr06-View
ST09G008930Laccase (AHRD V1 **** O24042_LIRTU); contains Interpro domain(s) IPR017761 Laccasechr09-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G03470No description available.scaffold_5+View
TC0009G31240No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G11950similar to AT2G29130|LAC2 (laccase 2)ch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G05060name=GSVIVG01016513001;chr13-View


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Gene id
Species
Description
Chromosome
Strand