Anchorpoints

Gene id
AL4G07280
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL7G08560No description available.scaffold_7-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G25820encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: sepal, root, seed, stamen; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G32800.1); Has 5828 Blast hits to 5681 proteins in 265 species: Archae - 0; Bacteria - 5; Metazoa - 20; Fungi - 4; Plants - 5778; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).2+View
AT4G32800Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G11590.1); Has 5524 Blast hits to 5510 proteins in 242 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5517; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein4+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G14870No description available.A04+View
BR03G53030No description available.A03+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G07280No description available.scaffold_7-View
CRU_004G05470No description available.scaffold_4+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G04670No description available.scaffold_3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G08901No description available.Gm04+View
GM06G08990No description available.Gm06+View
GM13G43210No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G05020No description available.Chr09-View
GR10G10660No description available.Chr10-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G45250No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G23860No description available.Chr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G04220No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G05630similar to AT2G25820|transcription factorch4-2+View


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Gene id
Species
Description
Chromosome
Strand