Anchorpoints

Gene id
AL4G01950
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL8G32230No description available.scaffold_8-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G10440cyclin d4;2 (CYCD4;2); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2823 Blast hits to 2820 proteins in 293 species: Archae - 0; Bacteria - 0; Metazoa - 1255; Fungi - 334; Plants - 962; Viruses - 9; Other Eukaryotes - 263 (source: NCBI BLink). Encodes a cyclin involved in cell proliferation during stomatal cell lineage development. cyclin d4;25-View
AT5G65420CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1). CYCLIN D4;1 Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.5-View
AT2G22490Cyclin D2;1 encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A. Cyclin D2;1 (CYCD2;1); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G56000No description available.A03+View
BR06G23290No description available.A06-View
BR02G41130No description available.A02-View
BR04G12600No description available.A04-View
BR09G09620No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G05460No description available.Bvchr6.sca005-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G18730No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G07540No description available.CM3.5_scaffold00007+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G00360No description available.supercontig_55-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G25490No description available.scaffold_8-View
CRU_004G01560No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00059G00420No description available.scaffold00059+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G17270No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G26270Cyclin-D2-1 (CycD2) (putative)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G38440No description available.Gm08+View
GM01G03030No description available.Gm01+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G05930No description available.Chr07+View
GR07G23360No description available.Chr07+View
GR10G03580No description available.Chr10+View
GR08G09210No description available.Chr08+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G014760No description available.11+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G032550carboxy-terminal domain cyclinchr5+View
MT8G068950carboxy-terminal domain cyclinchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G42860cyclin, putative, expressed Cyclin-D2-27-View
OS06G11410Cyclin-D3-1 cyclin, putative, expressed6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G20360No description available.scaffold_6-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G010460Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA)%3B contains Interpro domain(s) IPR015451 Cyclin Dch11-View
SL05G051410Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA)%3B contains Interpro domain(s) IPR015451 Cyclin Dch05+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G009240Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA); contains Interpro domain(s) IPR015451 Cyclin Dchr11+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G06590No description available.scaffold_8-View
TC0001G08870No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G33010similar to AT5G10440|CYCD4ch6-6+View
TP4G01510similar to AT2G22490|CYCD2ch4-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G04300name=GSVIVG01009139001;chr18-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G27460No description available.7+View


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Description
Chromosome
Strand