Anchorpoints

Gene id
AL4G01680
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL7G01980No description available.scaffold_7-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G22200Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G39780.1); Has 5636 Blast hits to 5603 proteins in 247 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 5606; Viruses - 6; Other Eukaryotes - 16 (source: NCBI BLink).2-View
AT4G39780encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G22200.1); Has 5858 Blast hits to 5712 proteins in 253 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 5812; Viruses - 11; Other Eukaryotes - 25 (source: NCBI BLink).4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G12370No description available.A04-View
BR03G56390No description available.A03-View
BR06G23030No description available.A06+View
BR01G00690No description available.A01-View
BR08G19600No description available.A08+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G13290No description available.Bvchr6.sca004-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G19140No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G07990No description available.CM3.5_scaffold00007-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G01290No description available.scaffold_4-View
CRU_007G01570No description available.scaffold_7-View
CRU_008G25200No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00099G00300No description available.scaffold00099-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G02170No description available.Gm18-View
GM08G14600No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G24070No description available.Chr07-View
GR03G03820No description available.Chr03+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08265G00630No description available.scaffold08265+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS06G11860ethylene-responsive transcription factor, putative, expressed6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G07730No description available.Chr05-View
PT07G09060No description available.Chr07+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G054910Ethylene-responsive transcription factor 13 (AHRD V1 *-*- ERF99_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch04+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G011030Ethylene responsive transcription factor 2a (AHRD V1 *-*- C0J9I7_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr04-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G10020No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G01260similar to AT2G22200|AP2 domain-containing transcription factorch4-1-View
TP7G36120similar to AT4G39780|AP2 domain-containing transcription factor, putativech7-6+View


Download

Gene id
Species
Description
Chromosome
Strand