Anchorpoints

Gene id
AL3G39760
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL7G03990No description available.scaffold_7+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G18600Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity, acid-amino acid ligase activity, ATP binding; INVOLVED IN: regulation of protein metabolic process, protein modification process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: RUB1 conjugating enzyme 1 (TAIR:AT4G36800.2); Has 8339 Blast hits to 8336 proteins in 387 species: Archae - 0; Bacteria - 2; Metazoa - 3796; Fungi - 1734; Plants - 1481; Viruses - 20; Other Eukaryotes - 1306 (source: NCBI BLink). Ubiquitin-conjugating enzyme family protein2-View
AT4G36800RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). RUB1 conjugating enzyme 1 RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.4-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G07820No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G05170No description available.CM3.5_scaffold00007-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00158G00160No description available.supercontig_158-View
CP00062G01080No description available.supercontig_62+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G03270No description available.scaffold_7+View
CRU_003G31640No description available.scaffold_3-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G10710No description available.scaffold_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G37900NEDD8-conjugating enzyme Ubc12 (putative)LG5+View
FV2G51340NEDD8-conjugating enzyme Ubc12 (similar to)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G38470No description available.Gm01-View
GM11G06830No description available.Gm11+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G20630No description available.Chr07-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09260G00300No description available.scaffold09260-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G019480ubiquitin-conjugating enzymechr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G39060No description available.scaffold_1-View
PPE_007G17030No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G03090No description available.Chr07-View
PT09G11300No description available.Chr09+View
PT05G12650No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G03540No description available.30170+View
RC29646G00080No description available.29646+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G079970Ubiquitin-conjugating enzyme E2 11 (AHRD V1 ***- UBC11_ARATH)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch04+View
SL02G085690Ubiquitin-conjugating enzyme E2 4 (AHRD V1 ***- UBC4_SCHPO)%3B contains Interpro domain(s) IPR015580 RUB1 conjugating enzyme Ubc12ch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G028810Ubiquitin-conjugating enzyme (AHRD V1 ***- E9CHE9_9EUKA); contains Interpro domain(s) IPR015580 RUB1 conjugating enzyme Ubc12chr02-View
ST04G033240Ubiquitin-conjugating enzyme (AHRD V1 ***- E9CHE9_9EUKA); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2chr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G03940No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G32100similar to AT2G18600|RUB1-conjugating enzyme, putativech3-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G08440name=GSVIVG01009655001;chr18+View


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Gene id
Species
Description
Chromosome
Strand