Anchorpoints
- Gene id
- AL3G39760
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G18600 | Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity, acid-amino acid ligase activity, ATP binding; INVOLVED IN: regulation of protein metabolic process, protein modification process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: RUB1 conjugating enzyme 1 (TAIR:AT4G36800.2); Has 8339 Blast hits to 8336 proteins in 387 species: Archae - 0; Bacteria - 2; Metazoa - 3796; Fungi - 1734; Plants - 1481; Viruses - 20; Other Eukaryotes - 1306 (source: NCBI BLink). Ubiquitin-conjugating enzyme family protein | 2 | - | View |
AT4G36800 | RUB1 conjugating enzyme 1 (RCE1); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT2G18600.1); Has 8473 Blast hits to 8470 proteins in 386 species: Archae - 0; Bacteria - 0; Metazoa - 3871; Fungi - 1731; Plants - 1533; Viruses - 20; Other Eukaryotes - 1318 (source: NCBI BLink). RUB1 conjugating enzyme 1 RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1. | 4 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G07820 | No description available. | Chr1 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G05170 | No description available. | CM3.5_scaffold00007 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00158G00160 | No description available. | supercontig_158 | - | View |
CP00062G01080 | No description available. | supercontig_62 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G03270 | No description available. | scaffold_7 | + | View |
CRU_003G31640 | No description available. | scaffold_3 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G10710 | No description available. | scaffold_8 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G37900 | NEDD8-conjugating enzyme Ubc12 (putative) | LG5 | + | View |
FV2G51340 | NEDD8-conjugating enzyme Ubc12 (similar to) | LG2 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM01G38470 | No description available. | Gm01 | - | View |
GM11G06830 | No description available. | Gm11 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G20630 | No description available. | Chr07 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME09260G00300 | No description available. | scaffold09260 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT5G019480 | ubiquitin-conjugating enzyme | chr5 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G39060 | No description available. | scaffold_1 | - | View |
PPE_007G17030 | No description available. | scaffold_7 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT07G03090 | No description available. | Chr07 | - | View |
PT09G11300 | No description available. | Chr09 | + | View |
PT05G12650 | No description available. | Chr05 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G03540 | No description available. | 30170 | + | View |
RC29646G00080 | No description available. | 29646 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G079970 | Ubiquitin-conjugating enzyme E2 11 (AHRD V1 ***- UBC11_ARATH)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch04 | + | View |
SL02G085690 | Ubiquitin-conjugating enzyme E2 4 (AHRD V1 ***- UBC4_SCHPO)%3B contains Interpro domain(s) IPR015580 RUB1 conjugating enzyme Ubc12 | ch02 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G028810 | Ubiquitin-conjugating enzyme (AHRD V1 ***- E9CHE9_9EUKA); contains Interpro domain(s) IPR015580 RUB1 conjugating enzyme Ubc12 | chr02 | - | View |
ST04G033240 | Ubiquitin-conjugating enzyme (AHRD V1 ***- E9CHE9_9EUKA); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2 | chr04 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G03940 | No description available. | scaffold_1 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G32100 | similar to AT2G18600|RUB1-conjugating enzyme, putative | ch3-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G08440 | name=GSVIVG01009655001; | chr18 | + | View |