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Functional clusters
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WorkbenchAnchorpoints
- Gene id
- AL3G39080
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G36220 | ferulic acid 5-hydroxylase 1 (FAH1); FUNCTIONS IN: ferulate 5-hydroxylase activity, monooxygenase activity; INVOLVED IN: lignin biosynthetic process, response to UV-B, phenylpropanoid biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G04330.1); Has 34463 Blast hits to 34198 proteins in 1764 species: Archae - 58; Bacteria - 4180; Metazoa - 12146; Fungi - 7203; Plants - 9525; Viruses - 6; Other Eukaryotes - 1345 (source: NCBI BLink). encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1 | 4 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR06G24100 | No description available. | A06 | - | View |
| BR01G02310 | No description available. | A01 | + | View |
| BR03G55150 | No description available. | A03 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV6G16550 | No description available. | Bvchr6.sca002 | + | View |
Citrullus lanatus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CL01G20230 | No description available. | Chr1 | + | View |
| CL07G10300 | No description available. | Chr7 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00007G09190 | No description available. | CM3.5_scaffold00007 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00006G02030 | No description available. | supercontig_6 | + | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_007G03740 | No description available. | scaffold_7 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00017G00640 | No description available. | scaffold00017 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0010G20700 | No description available. | scaffold_10 | + | View |
| EG0009G20000 | No description available. | scaffold_9 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV1G14130 | Cytochrome P450 84A1 (F5H) (putative) | LG1 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM11G07850 | No description available. | Gm11 | + | View |
| GM01G37430 | No description available. | Gm01 | - | View |
| GM16G24341 | No description available. | Gm16 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR07G04960 | No description available. | Chr07 | - | View |
| GR07G19770 | No description available. | Chr07 | - | View |
| GR11G09980 | No description available. | Chr11 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD05G018710 | No description available. | 5 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME06512G00740 | No description available. | scaffold06512 | + | View |
| ME07520G02310 | No description available. | scaffold07520 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT8G076290 | cytochrome P450 family monooxygenase | chr8 | - | View |
| MT5G021390 | cytochrome P450 family ferulate hydroxylase | chr5 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_007G18540 | No description available. | scaffold_7 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT05G11750 | No description available. | Chr05 | - | View |
| PT07G01640 | No description available. | Chr07 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL02G084570 | Cytochrome P450 | ch02 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST02G027690 | Cytochrome P450 (AHRD V1 ***- A1E367_ISATI); contains Interpro domain(s) IPR002401 Cytochrome P450, E-class, group I | chr02 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0001G02210 | No description available. | scaffold_1 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP7G33960 | similar to AT4G36220|FAH1 (FERULIC ACID 5-HYDROXYLASE 1) | ch7-6 | - | View |
| TP3G31540 | similar to AT4G36220|FAH1 (FERULIC ACID 5-HYDROXYLASE 1) | ch3-6 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV04G01160 | name=GSVIVG01018832001; | chr4 | + | View |