Anchorpoints
- Gene id
- AL3G38400
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G21720 | No description available. | scaffold_1 | - | View |
AL7G05250 | No description available. | scaffold_7 | - | View |
AL2G25230 | No description available. | scaffold_2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G76310 | CYCLIN B2;4 CYCLIN B2;4 (CYCB2;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4261 Blast hits to 4252 proteins in 371 species: Archae - 0; Bacteria - 0; Metazoa - 1989; Fungi - 541; Plants - 1112; Viruses - 30; Other Eukaryotes - 589 (source: NCBI BLink). core cell cycle genes | 1 | - | View |
AT2G17620 | Cyclin B2;1 (CYCB2;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;2 (TAIR:AT4G35620.1); Has 4386 Blast hits to 4385 proteins in 373 species: Archae - 0; Bacteria - 0; Metazoa - 1994; Fungi - 552; Plants - 1134; Viruses - 37; Other Eukaryotes - 669 (source: NCBI BLink). Cyclin B2;1 | 2 | + | View |
AT4G35620 | Cyclin B2;2 (CYCB2;2); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;1 (TAIR:AT2G17620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Cyclin B2;2 | 4 | + | View |
AT1G20590 | Cyclin family protein; FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 3281 Blast hits to 3278 proteins in 328 species: Archae - 0; Bacteria - 0; Metazoa - 1609; Fungi - 468; Plants - 793; Viruses - 0; Other Eukaryotes - 411 (source: NCBI BLink). Cyclin family protein | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR06G24490 | No description available. | A06 | - | View |
BR06G14870 | No description available. | A06 | - | View |
BR09G09000 | No description available. | A09 | + | View |
BR08G25080 | No description available. | A08 | + | View |
BR03G54890 | No description available. | A03 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G21050 | No description available. | Chr1 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G10060 | No description available. | CM3.5_scaffold00007 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G04370 | No description available. | scaffold_7 | - | View |
CRU_003G30490 | No description available. | scaffold_3 | + | View |
CRU_001G19260 | No description available. | scaffold_1 | - | View |
CRU_002G21900 | No description available. | scaffold_2 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00002G06630 | No description available. | scaffold00002 | - | View |
CS00017G02100 | No description available. | scaffold00017 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G21930 | No description available. | scaffold_10 | - | View |
EG0006G14450 | No description available. | scaffold_6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM11G08960 | No description available. | Gm11 | - | View |
GM01G36430 | No description available. | Gm01 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR03G00300 | No description available. | Chr03 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD15G017040 | No description available. | 15 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07520G03310 | No description available. | scaffold07520 | - | View |
ME06512G01860 | No description available. | scaffold06512 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT8G074000 | carboxy-terminal domain cyclin | chr8 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G20130 | No description available. | scaffold_7 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G25140 | No description available. | Chr05 | - | View |
PT05G10000 | No description available. | Chr05 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29830G00500 | No description available. | 29830 | - | View |
RC30170G06830 | No description available. | 30170 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G094600 | Cyclin B (AHRD V1 **** B6V744_POPTO)%3B contains Interpro domain(s) IPR014400 Cyclin%2C A/B/D/E | ch12 | - | View |
SL03G032190 | Cyclin B2 (AHRD V1 **** Q9XGI1_SOLLC)%3B contains Interpro domain(s) IPR014400 Cyclin%2C A/B/D/E | ch03 | + | View |
SL04G082430 | B-like cyclin (AHRD V1 **** Q40337_MEDSA)%3B contains Interpro domain(s) IPR014400 Cyclin%2C A/B/D/E | ch04 | - | View |
SL02G082820 | Cyclin B2 (AHRD V1 **** Q9XGI1_SOLLC)%3B contains Interpro domain(s) IPR014400 Cyclin%2C A/B/D/E IPR006671 Cyclin%2C N-terminal | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G026170 | Cyclin B2 (AHRD V1 **** Q9XGI1_SOLLC); contains Interpro domain(s) IPR014400 Cyclin, A/B/D/E | chr02 | + | View |
ST12G027870 | Cyclin B (AHRD V1 **** B6V744_POPTO); contains Interpro domain(s) IPR014400 Cyclin, A/B/D/E | chr12 | - | View |
ST04G035880 | B-like cyclin (AHRD V1 **** Q40337_MEDSA); contains Interpro domain(s) IPR014400 Cyclin, A/B/D/E | chr04 | - | View |
ST03G008870 | Cyclin B2 (AHRD V1 **** Q9XGI1_SOLLC); contains Interpro domain(s) IPR014400 Cyclin, A/B/D/E | chr03 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G05780 | No description available. | scaffold_8 | - | View |
TC0001G00640 | No description available. | scaffold_1 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G31450 | similar to AT1G76310|CYCB2 | ch5-7 | - | View |
TP7G33390 | similar to AT4G35620|CYCB2 | ch7-6 | + | View |
TP3G30950 | similar to AT2G17620|CYCB2 | ch3-6 | + | View |
TP1G18300 | similar to AT1G20610|CYCB2 | ch1-1 | - | View |