Anchorpoints

Gene id
AL3G31730
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G06510replication protein A 1A replication protein A 1A (RPA1A); FUNCTIONS IN: DNA binding, nucleic acid binding; INVOLVED IN: in 6 processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1 Rpa1 (InterPro:IPR004591), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Replication factor A, C-terminal (InterPro:IPR013955), Replication factor-A protein 1, N-terminal (InterPro:IPR007199); BEST Arabidopsis thaliana protein match is: Replication factor-A protein 1-related (TAIR:AT4G19130.1); Has 932 Blast hits to 912 proteins in 229 species: Archae - 16; Bacteria - 0; Metazoa - 191; Fungi - 147; Plants - 421; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I.2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00024G02060No description available.scaffold00024-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G02740No description available.A07-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G17440No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00003G07790No description available.CM3.5_scaffold00003-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00028G00730No description available.supercontig_28+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G26240No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00140G00100No description available.scaffold00140+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G09880Replication protein A 70 kDa DNA-binding subunit (RP-A p70) (probable)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G07850No description available.Gm09+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G22570No description available.Chr13+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ6G016470No description available.chr6+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G015510No description available.15-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G041270replication protein A 70 kDa proteinchr2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G22230No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G14390No description available.Chr06+View
PT18G06530No description available.Chr18-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G025590Single-stranded DNA-binding replication protein A large subunit (AHRD V1 **** D2V0Z2_NAEGR)%3B contains Interpro domain(s) IPR004591 Replication factor-a protein 1 Rpa1ch05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G07630No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G24710similar to AT2G06510|RPA1A (REPLICATION PROTEIN A 1A)ch3-3+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G02810name=GSVIVG01015111001;chr11+View


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Gene id
Species
Description
Chromosome
Strand