Anchorpoints

Gene id
AL3G28190
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G24650ABA INSENSITIVE 3 (ABI3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 4494 Blast hits to 2758 proteins in 300 species: Archae - 0; Bacteria - 132; Metazoa - 1104; Fungi - 405; Plants - 1155; Viruses - 101; Other Eukaryotes - 1597 (source: NCBI BLink). AP2/B3-like transcriptional factor family protein Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G38060No description available.A03+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00008G01780No description available.supercontig_8-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G24020No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00029G00270No description available.scaffold00029+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G15630B3 domain-containing transcription factor ABI3 (probable)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G47240No description available.Gm08-View
GM18G38490No description available.Gm18-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD10G012910No description available.10-View
MD05G014990No description available.5+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G059330B3 domain transcription factorchr7-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G22260No description available.scaffold_8-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30204G00710No description available.30204-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G22570No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G22420similar to AT3G24650|ABI3 (ABA INSENSITIVE 3)ch3-2+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G12350name=GSVIVG01028540001;chr7+View


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Gene id
Species
Description
Chromosome
Strand