Anchorpoints

Gene id
AL3G24710
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G22400PLAT/LH2 domain-containing lipoxygenase family protein LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem.3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G21170No description available.A05-View
BR01G28840No description available.A01-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G05890No description available.Chr6+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00058G01170No description available.supercontig_58-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G21560No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00011G01030No description available.scaffold00011-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G28610No description available.scaffold_8-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G39470No description available.Gm10-View
GM20G28290No description available.Gm20+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G12110No description available.Chr13+View
GR05G04190No description available.Chr05+View
GR06G23820No description available.Chr06+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G018270No description available.13+View
MD16G014100No description available.16-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01551G02230No description available.scaffold01551-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G104650linoleate 9S-lipoxygenase-like proteinchr1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G15150No description available.Chr08+View
PT10G08950No description available.Chr10-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G075860Lipoxygenase (AHRD V1 **** Q41430_SOLTU)%3B contains Interpro domain(s) IPR001246 Lipoxygenase%2C plantch09+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G23170No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G20160similar to AT3G22400|LOX5ch3-1+View


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Gene id
Species
Description
Chromosome
Strand