Anchorpoints
- Gene id
- AL3G21890
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G50490 | ubiquitin-conjugating enzyme 20 (UBC20); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme E2 H10 (InterPro:IPR015582), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme19 (TAIR:AT3G20060.1); Has 10004 Blast hits to 9989 proteins in 393 species: Archae - 0; Bacteria - 0; Metazoa - 4460; Fungi - 2092; Plants - 1828; Viruses - 23; Other Eukaryotes - 1601 (source: NCBI BLink). ubiquitin-conjugating enzyme 20 Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells. | 1 | - | View |
AT3G20060 | Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in dividing cells, but also in other non-dividing cells. Protein is localized to the cytoplasm as well as to the nucleus. ubiquitin-conjugating enzyme19 (UBC19); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme E2 H10 (InterPro:IPR015582), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 20 (TAIR:AT1G50490.1); Has 2436 Blast hits to 2429 proteins in 193 species: Archae - 0; Bacteria - 0; Metazoa - 552; Fungi - 119; Plants - 1682; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). ubiquitin-conjugating enzyme19 | 3 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G30110 | No description available. | A01 | + | View |
BR08G02910 | No description available. | A08 | + | View |
BR06G02970 | No description available. | A06 | + | View |
BR05G23570 | No description available. | A05 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G37600 | No description available. | scaffold_1 | - | View |
CRU_003G19050 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G37330 | similar to AT1G50490|UBC20 (ubiquitin-conjugating enzyme 20) | ch1-2 | - | View |
TP3G18090 | similar to AT3G20060|UBC19 (ubiquitin-conjugating enzyme19) | ch3-1 | - | View |