Anchorpoints

Gene id
AL3G16300
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G15370expansin 12 expansin 12 (EXPA12); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A17 (TAIR:AT4G01630.1); Has 2144 Blast hits to 2141 proteins in 152 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 40; Plants - 2066; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G34380No description available.A03+View
BR05G27660No description available.A05-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G06430No description available.Chr7+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00028G01090No description available.CM3.5_scaffold00028+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00080G00510No description available.supercontig_80-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G14350No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00012G00060No description available.scaffold00012+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G38100No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G07160No description available.Chr02+View
GR05G20220No description available.Chr05+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G022180No description available.11+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G17600No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G40170No description available.Chr01+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G063210Expansin S2 (AHRD V1 ***- Q39626_CUCSA)%3B contains Interpro domain(s) IPR002963 Expansinch07+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G024000Expansin S2 (AHRD V1 ***- Q39626_CUCSA); contains Interpro domain(s) IPR002963 Expansinchr07-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0007G07680No description available.scaffold_7-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G13620similar to AT3G15370|ATEXPA12 (ARABIDOPSIS THALIANA EXPANSIN 12)ch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G03130name=GSVIVG01014362001;chr19+View


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Gene id
Species
Description
Chromosome
Strand