Anchorpoints
- Gene id
- AL3G15860
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G15070 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G53190.2); Has 7358 Blast hits to 7345 proteins in 274 species: Archae - 0; Bacteria - 4; Metazoa - 2154; Fungi - 590; Plants - 3295; Viruses - 49; Other Eukaryotes - 1266 (source: NCBI BLink). | 3 | - | View |
AT1G53190 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G15070.2); Has 8436 Blast hits to 8420 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 2403; Fungi - 639; Plants - 3969; Viruses - 29; Other Eukaryotes - 1396 (source: NCBI BLink). | 1 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00021G01500 | No description available. | scaffold00021 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G34270 | No description available. | A03 | - | View |
BR05G27990 | No description available. | A05 | + | View |
BR05G16910 | No description available. | A05 | - | View |
BR06G01260 | No description available. | A06 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV4G05500 | No description available. | Bvchr4.sca013 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL07G11310 | No description available. | Chr7 | + | View |
CL11G11670 | No description available. | Chr11 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00027G00260 | No description available. | CM3.5_scaffold00027 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G13990 | No description available. | scaffold_3 | - | View |
CRU_001G40440 | No description available. | scaffold_1 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00076G00120 | No description available. | scaffold00076 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G09570 | No description available. | scaffold_6 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV3G17810 | RING finger protein 44 (probable) | LG3 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM12G20230 | No description available. | Gm12 | - | View |
GM13G34790 | No description available. | Gm13 | + | View |
GM06G34970 | No description available. | Gm06 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G32560 | No description available. | Chr07 | + | View |
GR13G17230 | No description available. | Chr13 | + | View |
GR02G06560 | No description available. | Chr02 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD11G023200 | No description available. | 11 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06611G00090 | No description available. | scaffold06611 | - | View |
ME03741G00710 | No description available. | scaffold03741 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G078440 | zinc finger C C3HC4 type (RING finger) protein | chr2 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G16520 | No description available. | scaffold_4 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G37370 | No description available. | Chr01 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G062720 | RING-finger protein-like (AHRD V1 *-*- Q5QLR6_ORYSJ)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch07 | - | View |
SL12G014070 | RING-finger protein-like (AHRD V1 ***- Q5QLR6_ORYSJ)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch12 | + | View |
SL10G007140 | RING-finger protein like (AHRD V1 *-*- B6SVN2_MAIZE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch10 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST07G024510 | RING-finger protein-like (AHRD V1 *-*- Q5QLR6_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr07 | + | View |
ST12G005360 | RING-finger protein-like (AHRD V1 ***- Q5QLR6_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr12 | - | View |
ST10G008100 | Zinc finger protein (AHRD V1 *-*- Q00M69_SOYBN) | chr10 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0007G09410 | No description available. | scaffold_7 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G39770 | similar to AT1G53190|zinc finger (C3HC4-type RING finger) family protein | ch1-2 | + | View |
TP3G13270 | similar to AT3G15070|zinc finger (C3HC4-type RING finger) family protein | ch3-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV19G02250 | name=GSVIVG01014254001; | chr19 | - | View |