Anchorpoints

Gene id
AL3G15860
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G48270No description available.scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G15070RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G53190.2); Has 7358 Blast hits to 7345 proteins in 274 species: Archae - 0; Bacteria - 4; Metazoa - 2154; Fungi - 590; Plants - 3295; Viruses - 49; Other Eukaryotes - 1266 (source: NCBI BLink).3-View
AT1G53190RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G15070.2); Has 8436 Blast hits to 8420 proteins in 276 species: Archae - 0; Bacteria - 0; Metazoa - 2403; Fungi - 639; Plants - 3969; Viruses - 29; Other Eukaryotes - 1396 (source: NCBI BLink).1+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00021G01500No description available.scaffold00021-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G34270No description available.A03-View
BR05G27990No description available.A05+View
BR05G16910No description available.A05-View
BR06G01260No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV4G05500No description available.Bvchr4.sca013-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G11310No description available.Chr7+View
CL11G11670No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00027G00260No description available.CM3.5_scaffold00027+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G13990No description available.scaffold_3-View
CRU_001G40440No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00076G00120No description available.scaffold00076-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G09570No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G17810RING finger protein 44 (probable)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G20230No description available.Gm12-View
GM13G34790No description available.Gm13+View
GM06G34970No description available.Gm06-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G32560No description available.Chr07+View
GR13G17230No description available.Chr13+View
GR02G06560No description available.Chr02-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G023200No description available.11+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06611G00090No description available.scaffold06611-View
ME03741G00710No description available.scaffold03741-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G078440zinc finger C C3HC4 type (RING finger) proteinchr2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G16520No description available.scaffold_4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G37370No description available.Chr01+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G062720RING-finger protein-like (AHRD V1 *-*- Q5QLR6_ORYSJ)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech07-View
SL12G014070RING-finger protein-like (AHRD V1 ***- Q5QLR6_ORYSJ)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech12+View
SL10G007140RING-finger protein like (AHRD V1 *-*- B6SVN2_MAIZE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech10+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G024510RING-finger protein-like (AHRD V1 *-*- Q5QLR6_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr07+View
ST12G005360RING-finger protein-like (AHRD V1 ***- Q5QLR6_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr12-View
ST10G008100Zinc finger protein (AHRD V1 *-*- Q00M69_SOYBN)chr10-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0007G09410No description available.scaffold_7+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G39770similar to AT1G53190|zinc finger (C3HC4-type RING finger) family proteinch1-2+View
TP3G13270similar to AT3G15070|zinc finger (C3HC4-type RING finger) family proteinch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G02250name=GSVIVG01014254001;chr19-View


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Gene id
Species
Description
Chromosome
Strand