Anchorpoints

Gene id
AL3G12920
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G12500encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase (HCHIB); FUNCTIONS IN: chitinase activity; INVOLVED IN: response to cadmium ion, defense response to fungus, jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT4G01700.1); Has 2944 Blast hits to 2653 proteins in 549 species: Archae - 0; Bacteria - 615; Metazoa - 38; Fungi - 228; Plants - 1922; Viruses - 10; Other Eukaryotes - 131 (source: NCBI BLink). basic chitinase3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G30310No description available.A05+View
BR01G36530No description available.A01+View
BR03G32980No description available.A03-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G11310No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G10630similar to AT3G12500|ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)ch3-1-View


Download

Gene id
Species
Description
Chromosome
Strand