Anchorpoints
- Gene id
- AL3G11330
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G10920 | manganese superoxide dismutase (MSD1) manganese superoxide dismutase 1 manganese superoxide dismutase 1 (MSD1); FUNCTIONS IN: superoxide dismutase activity, copper ion binding, metal ion binding; INVOLVED IN: response to zinc ion, response to salt stress, defense response to bacterium, removal of superoxide radicals, embryo development ending in seed dormancy; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Iron/manganese superoxide dismutase family protein (TAIR:AT3G56350.1); Has 11404 Blast hits to 11403 proteins in 3385 species: Archae - 194; Bacteria - 8096; Metazoa - 447; Fungi - 710; Plants - 427; Viruses - 1; Other Eukaryotes - 1529 (source: NCBI BLink). | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G31600 | No description available. | A05 | - | View |
BR09G37070 | No description available. | A09 | - | View |
BR01G38100 | No description available. | A01 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00019G00700 | No description available. | supercontig_19 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_005G21830 | No description available. | scaffold_5 | - | View |
CRU_003G09760 | No description available. | scaffold_3 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0007G25050 | No description available. | scaffold_7 | - | View |
EG0010G01090 | No description available. | scaffold_10 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G25170 | No description available. | scaffold_2 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G049080 | Superoxide dismutase (AHRD V1 **** A5BR41_VITVI)%3B contains Interpro domain(s) IPR001189 Manganese/iron superoxide dismutase | ch06 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G09250 | similar to AT3G10920|MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1) | ch3-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV13G09230 | name=GSVIVG01032675001; | chr13 | + | View |