Anchorpoints

Gene id
AL3G07460
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G48760Ribosomal protein L13 family protein Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT4G13170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View
AT3G07110Ribosomal protein L13 family protein Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13 (InterPro:IPR005822), Ribosomal protein L13, eukaryotic/archaeal (InterPro:IPR005755); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT5G48760.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G35020No description available.A02-View
BR09G04710No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G14730No description available.Bvchr7.sca019+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00008G01450No description available.supercontig_8-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G08400No description available.scaffold_8-View
CRU_003G24220No description available.scaffold_3+View
CRU_003G06350No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00029G00620No description available.scaffold00029+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G06830No description available.scaffold_8-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G46850No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G18670No description available.Chr01+View
GR07G15460No description available.Chr07+View
GR06G22220No description available.Chr06+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD10G012260No description available.10-View
MD05G015620No description available.5+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11661G00220No description available.scaffold11661-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G21810No description available.scaffold_8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G24260No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30204G00290No description available.30204-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G22040No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G19170similar to AT5G48760|60S ribosomal protein L13A (RPL13aD)ch2-4-View
TP3G06050similar to AT3G07110|60S ribosomal protein L13A (RPL13aA)ch3-1-View
TP3G22570similar to AT3G24830|60S ribosomal protein L13A (RPL13aB)ch3-2+View


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Gene id
Species
Description
Chromosome
Strand