Anchorpoints

Gene id
AL3G03200
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G03740BTB-POZ and MATH domain 4 Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB-POZ and MATH domain 4 (BPM4); CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), BTB/POZ fold (InterPro:IPR011333), BTB/POZ (InterPro:IPR013069), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: BTB-POZ and MATH domain 5 (TAIR:AT5G21010.1); Has 5789 Blast hits to 5682 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 3860; Fungi - 138; Plants - 1466; Viruses - 48; Other Eukaryotes - 277 (source: NCBI BLink).3-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00004G00850No description available.scaffold00004-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G00670No description available.A07-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00010G00700No description available.CM3.5_scaffold00010+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00161G00270No description available.supercontig_161+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G02760No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00029G01310No description available.scaffold00029-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G12700No description available.scaffold_11+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G29420No description available.Gm19+View
GM16G04060No description available.Gm16-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G25590No description available.Chr07-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G000520No description available.14+View
MD12G001040No description available.12+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02431G00200No description available.scaffold02431-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G086500BTB/POZ/MATH-domain proteinchr7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G07270MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed7-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G02060No description available.scaffold_7-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT19G03950No description available.Chr19+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30072G00220No description available.30072-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G24320No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G02710similar to AT3G03740|ATBPM4 (BTB-POZ and MATH domain 4)ch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G05610name=GSVIVG01029981001;chr8+View


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Gene id
Species
Description
Chromosome
Strand