Anchorpoints

Gene id
AL3G01460
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL6G15660No description available.scaffold_6+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G15820RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02340.1); Has 8420 Blast hits to 8405 proteins in 260 species: Archae - 0; Bacteria - 6; Metazoa - 2461; Fungi - 626; Plants - 4186; Viruses - 29; Other Eukaryotes - 1112 (source: NCBI BLink). RING/U-box superfamily protein5+View
AT3G02340RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15820.1); Has 9104 Blast hits to 9081 proteins in 277 species: Archae - 2; Bacteria - 2; Metazoa - 2595; Fungi - 690; Plants - 4590; Viruses - 42; Other Eukaryotes - 1183 (source: NCBI BLink).3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G07660No description available.A02+View
BR01G34900No description available.A01+View
BR10G19370No description available.A10-View
BR06G31470No description available.A06-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G13840No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00051G01050No description available.CM3.5_scaffold00051+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G13640No description available.scaffold_6+View
CRU_003G01360No description available.scaffold_3+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G12550No description available.scaffold_10+View
EG0009G17580No description available.scaffold_9+View
EG0002G05640No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G41650E3 ubiquitin-protein ligase CIP8 (probable)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G05040No description available.Gm19+View
GM17G09000No description available.Gm17+View
GM13G06960No description available.Gm13+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G005480No description available.9+View
MD17G005810No description available.17+View
MD06G017210No description available.6+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06871G01120No description available.scaffold06871-View
ME06609G00290No description available.scaffold06609+View
ME04043G01500No description available.scaffold04043-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT6G016350zinc finger C C3HC4 type (RING finger) proteinchr6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G22540No description available.scaffold_3-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G089410RING finger protein 13 (AHRD V1 *-*- RNF13_CHICK)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech02+View
SL02G065650RING finger protein 13 (AHRD V1 *--- RNF13_BOVIN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G033480E3 ubiquitin-protein ligase CG7694 (AHRD V1 *--- RN181_DROME); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr02-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G28290similar to AT3G02340|zinc finger (C3HC4-type RING finger) family proteinch6-6-View
TP3G01400similar to AT3G02340|zinc finger (C3HC4-type RING finger) family proteinch3-1+View


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Gene id
Species
Description
Chromosome
Strand