Anchorpoints
- Gene id
- AL3G01460
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G15820 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02340.1); Has 8420 Blast hits to 8405 proteins in 260 species: Archae - 0; Bacteria - 6; Metazoa - 2461; Fungi - 626; Plants - 4186; Viruses - 29; Other Eukaryotes - 1112 (source: NCBI BLink). RING/U-box superfamily protein | 5 | + | View |
AT3G02340 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15820.1); Has 9104 Blast hits to 9081 proteins in 277 species: Archae - 2; Bacteria - 2; Metazoa - 2595; Fungi - 690; Plants - 4590; Viruses - 42; Other Eukaryotes - 1183 (source: NCBI BLink). | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G07660 | No description available. | A02 | + | View |
BR01G34900 | No description available. | A01 | + | View |
BR10G19370 | No description available. | A10 | - | View |
BR06G31470 | No description available. | A06 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL11G13840 | No description available. | Chr11 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00051G01050 | No description available. | CM3.5_scaffold00051 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_006G13640 | No description available. | scaffold_6 | + | View |
CRU_003G01360 | No description available. | scaffold_3 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G12550 | No description available. | scaffold_10 | + | View |
EG0009G17580 | No description available. | scaffold_9 | + | View |
EG0002G05640 | No description available. | scaffold_2 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G41650 | E3 ubiquitin-protein ligase CIP8 (probable) | LG6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM19G05040 | No description available. | Gm19 | + | View |
GM17G09000 | No description available. | Gm17 | + | View |
GM13G06960 | No description available. | Gm13 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD09G005480 | No description available. | 9 | + | View |
MD17G005810 | No description available. | 17 | + | View |
MD06G017210 | No description available. | 6 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06871G01120 | No description available. | scaffold06871 | - | View |
ME06609G00290 | No description available. | scaffold06609 | + | View |
ME04043G01500 | No description available. | scaffold04043 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT6G016350 | zinc finger C C3HC4 type (RING finger) protein | chr6 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_003G22540 | No description available. | scaffold_3 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G089410 | RING finger protein 13 (AHRD V1 *-*- RNF13_CHICK)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch02 | + | View |
SL02G065650 | RING finger protein 13 (AHRD V1 *--- RNF13_BOVIN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch02 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G033480 | E3 ubiquitin-protein ligase CG7694 (AHRD V1 *--- RN181_DROME); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr02 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G28290 | similar to AT3G02340|zinc finger (C3HC4-type RING finger) family protein | ch6-6 | - | View |
TP3G01400 | similar to AT3G02340|zinc finger (C3HC4-type RING finger) family protein | ch3-1 | + | View |