Anchorpoints
- Gene id
- AL3G01230
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G02150 | plastid transcription factor 1 (PTF1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: cell differentiation, positive regulation of development, heterochronic, regulation of transcription, leaf morphogenesis; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 (TAIR:AT5G60970.1); Has 1452 Blast hits to 1452 proteins in 313 species: Archae - 0; Bacteria - 0; Metazoa - 41; Fungi - 8; Plants - 1374; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation. plastid transcription factor 1 | 3 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00154G00470 | No description available. | scaffold00154 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G28790 | No description available. | A03 | + | View |
BR05G35790 | No description available. | A05 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL04G11520 | No description available. | Chr4 | - | View |
CL06G16140 | No description available. | Chr6 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00001G01270 | No description available. | CM3.5_scaffold00001 | + | View |
CM00030G01560 | No description available. | CM3.5_scaffold00030 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00014G01890 | No description available. | supercontig_14 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G01200 | No description available. | scaffold_3 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00015G02630 | No description available. | scaffold00015 | + | View |
CS00030G00970 | No description available. | scaffold00030 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G17100 | No description available. | scaffold_9 | + | View |
EG0002G05250 | No description available. | scaffold_2 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G42330 | Transcription factor TCP13 (probable) | LG6 | - | View |
FV5G11920 | Transcription factor TCP5 (similar to) | LG5 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM05G00300 | No description available. | Gm05 | - | View |
GM06G22240 | No description available. | Gm06 | + | View |
GM04G32324 | No description available. | Gm04 | - | View |
GM18G50371 | No description available. | Gm18 | + | View |
GM08G27155 | No description available. | Gm08 | + | View |
GM19G03786 | No description available. | Gm19 | + | View |
GM17G08761 | No description available. | Gm17 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G00980 | No description available. | Chr06 | + | View |
GR01G07670 | No description available. | Chr01 | - | View |
GR12G04850 | No description available. | Chr12 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD17G005200 | No description available. | 17 | + | View |
MD06G016760 | No description available. | 6 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME08359G01580 | No description available. | scaffold08359 | - | View |
ME06609G00030 | No description available. | scaffold06609 | + | View |
ME06656G01030 | No description available. | scaffold06656 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G20980 | No description available. | scaffold_5 | + | View |
PPE_003G23190 | No description available. | scaffold_3 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT17G09480 | No description available. | Chr17 | + | View |
PT15G05880 | No description available. | Chr15 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30138G01280 | No description available. | 30138 | - | View |
RC29905G00210 | No description available. | 29905 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G115010 | Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *-*- CYCLD_ANTML)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch03 | - | View |
SL02G065800 | Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *-*- CYCLD_ANTML)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch02 | - | View |
SL02G089020 | Transcription factor (Fragment) (AHRD V1 *-*- D6MK40_9ASPA)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP | ch02 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G012660 | Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *--- CYCLD_ANTML); contains Interpro domain(s) IPR005333 Transcription factor, TCP | chr02 | - | View |
ST02G033910 | Transcription factor (Fragment) (AHRD V1 *-*- D6MK40_9ASPA); contains Interpro domain(s) IPR005333 Transcription factor, TCP | chr02 | - | View |
ST03G028540 | Transcription factor CYCLOIDEA (Fragment) (AHRD V1 *-*- CYCLD_ANTMH); contains Interpro domain(s) IPR005333 Transcription factor, TCP | chr03 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G10700 | No description available. | scaffold_3 | + | View |
TC0004G10190 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G01220 | similar to AT3G02150|PTF1 (PLASTID TRANSCRIPTION FACTOR 1) | ch3-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G13070 | name=GSVIVG01032911001; | chr14 | + | View |
VV17G04620 | name=GSVIVG01008109001; | chr17 | - | View |