Anchorpoints

Gene id
AL2G27390
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G15320No description available.scaffold_3-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G78390nine-cis-epoxycarotenoid dioxygenase 9 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. nine-cis-epoxycarotenoid dioxygenase 9 (NCED9); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 3 (TAIR:AT3G14440.1); Has 2892 Blast hits to 2853 proteins in 497 species: Archae - 16; Bacteria - 810; Metazoa - 240; Fungi - 201; Plants - 889; Viruses - 0; Other Eukaryotes - 736 (source: NCBI BLink).1-View
AT3G14440nine-cis-epoxycarotenoid dioxygenase 3 (NCED3); CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 9 (TAIR:AT1G78390.1); Has 2945 Blast hits to 2901 proteins in 493 species: Archae - 16; Bacteria - 796; Metazoa - 281; Fungi - 204; Plants - 893; Viruses - 0; Other Eukaryotes - 755 (source: NCBI BLink). nine-cis-epoxycarotenoid dioxygenase 3 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane.3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G28530No description available.A05+View
BR03G33970No description available.A03-View
BR07G33150No description available.A07-View
BR02G24770No description available.A02-View
BR01G33990No description available.A01+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G09300No description available.Chr11+View
CL07G15150No description available.Chr7+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00077G01030No description available.supercontig_77+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G13480No description available.scaffold_3-View
CRU_002G23880No description available.scaffold_2-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G11210No description available.scaffold_6+View
EG0006G27040No description available.scaffold_6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G40070No description available.Gm15+View
GM12G36530No description available.Gm12+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G03810No description available.Chr02-View
GR13G17710No description available.Chr13+View
GR04G27080No description available.Chr04+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G0704609-cis-epoxycarotenoid dioxygenasechr2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G11240No description available.Chr11+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G0565709-cis-epoxycarotenoid dioxygenasech07-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G0256909-cis-epoxycarotenoid dioxygenase (AHRD V1 **** O24023_SOLLC); contains Interpro domain(s) IPR004294 Carotenoid oxygenasechr07+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0007G13780No description available.scaffold_7+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G33490similar to AT1G78390|NCED9 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9)ch5-7-View


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Gene id
Species
Description
Chromosome
Strand