Anchorpoints

Gene id
AL2G25440
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL3G38110No description available.scaffold_3+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G76490Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine hydroxy methylglutaryl CoA reductase 1 hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink).1+View
AT2G17370Encodes a 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) that is involved in the synthesis of sterol and triterpenoid compounds. 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA reductase 2 (HMG2); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: hydroxy methylglutaryl CoA reductase 1 (TAIR:AT1G76490.1); Has 2106 Blast hits to 2105 proteins in 886 species: Archae - 203; Bacteria - 937; Metazoa - 224; Fungi - 225; Plants - 261; Viruses - 1; Other Eukaryotes - 255 (source: NCBI BLink).2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00022G01230No description available.scaffold00022+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G31780No description available.A07+View
BR02G23800No description available.A02+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G04050No description available.Bvchr9.sca025+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G03190No description available.Chr2-View
CL08G08980No description available.Chr8+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00096G00160No description available.CM3.5_scaffold00096+View
CM00026G00080No description available.CM3.5_scaffold00026-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G00070No description available.supercontig_26-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G22090No description available.scaffold_2+View
CRU_003G30220No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G07180No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G12730No description available.scaffold_9+View
EG0006G30700No description available.scaffold_6+View
EG0006G14870No description available.scaffold_6-View
EG0009G18510No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G126103-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (HMG-CoA reductase 2) (putative)LG2-View
FV1G117403-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (HMG-CoA reductase 1) (putative)LG1-View
FV5G284903-hydroxy-3-methylglutaryl-coenzyme A reductase 1 (HMG-CoA reductase 1) (putative)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G32850No description available.Gm09-View
GM11G09330No description available.Gm11+View
GM01G36080No description available.Gm01-View
GM16G21620No description available.Gm16+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G21550No description available.Chr05-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G009000No description available.2-View
MD10G010330No description available.10+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07520G03670No description available.scaffold07520+View
ME06512G02230No description available.scaffold06512+View
ME04047G00030No description available.scaffold04047+View
ME06582G00700No description available.scaffold06582-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G0248803-hydroxy-3-methylglutaryl-coenzyme A reductase-like proteinchr5+View
MT8G0726403-hydroxy-3-methylglutaryl-coenzyme A reductase-like proteinchr8-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G401803-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed 3-hydroxy-3-methylglutaryl-coenzyme A reductase 38+View
OS02G483303-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G19930No description available.scaffold_8+View
PPE_007G20760No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G14500No description available.Chr11+View
PT05G25700No description available.Chr05+View
PT01G45700No description available.Chr01-View
PT02G00400No description available.Chr02-View
PT04G20850No description available.Chr04+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G07400No description available.30170+View
RC30162G00310No description available.30162+View
RC29682G00040No description available.29682+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G032010Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC)%3B contains Interpro domain(s) IPR002202 Hydroxymethylglutaryl-CoA reductase%2C class I/II%2C catalyticch03-View
SL02G082260Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC)%3B contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase%2C class I%2C catalyticch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G008670Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC); contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase, class I, catalytic 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3chr03-View
ST02G025630Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC); contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase, class I, catalyticchr02-View
ST04G0363003-hydroxy-3-methylglutaryl coenzyme A reductase (AHRD V1 **** E5L3S1_9SOLA); contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase, class I, catalyticchr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G00200No description available.scaffold_1-View
TC0008G09550No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G31650similar to AT1G76490|HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1)ch5-7+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G04710name=GSVIVG01026444001;chr4+View
VV18G12850name=GSVIVG01013435001;chr18-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G32360No description available.4+View
ZM05G38380No description available.5-View
ZM04G22590No description available.4-View


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Gene id
Species
Description
Chromosome
Strand