Anchorpoints
- Gene id
- AL2G24920
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G00130 | No description available. | scaffold_7 | - | View |
AL3G20650 | No description available. | scaffold_3 | + | View |
AL5G20030 | No description available. | scaffold_5 | + | View |
AL5G18500 | No description available. | scaffold_5 | - | View |
AL1G12950 | No description available. | scaffold_1 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G49370 | Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT5G24430.1); Has 120826 Blast hits to 119042 proteins in 3470 species: Archae - 178; Bacteria - 14958; Metazoa - 45068; Fungi - 12844; Plants - 26097; Viruses - 535; Other Eukaryotes - 21146 (source: NCBI BLink). Calcium-dependent protein kinase (CDPK) family protein | 3 | - | View |
AT3G50530 | CDPK-related kinase CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1). CDPK-related kinase | 3 | + | View |
AT3G19100 | Protein kinase superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT1G49580.1); Has 120241 Blast hits to 118384 proteins in 3609 species: Archae - 140; Bacteria - 14458; Metazoa - 44881; Fungi - 12679; Plants - 26503; Viruses - 512; Other Eukaryotes - 21068 (source: NCBI BLink). Protein kinase superfamily protein | 3 | + | View |
AT1G76040 | member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 29 (CPK29); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1); Has 142530 Blast hits to 132137 proteins in 3984 species: Archae - 133; Bacteria - 14530; Metazoa - 52901; Fungi - 18639; Plants - 31038; Viruses - 504; Other Eukaryotes - 24785 (source: NCBI BLink). calcium-dependent protein kinase 29 | 1 | + | View |
AT2G17890 | calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). calcium-dependent protein kinase 16 Encodes a member of Calcium Dependent Protein Kinase. Protein is N-myristoylated. Localizes to the plasma membrane. Localizes to the chloroplast when the myristoylation motif is mutated. | 2 | - | View |
AT4G38230 | calcium-dependent protein kinase 26 (CPK26); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase family protein (TAIR:AT2G17290.1). calcium-dependent protein kinase 26 member of Calcium Dependent Protein Kinase | 4 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00024G03000 | No description available. | scaffold00024 | - | View |
ATR_00044G00740 | No description available. | scaffold00044 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G35790 | No description available. | A03 | + | View |
BR01G02970 | No description available. | A01 | - | View |
BR07G31220 | No description available. | A07 | + | View |
BR09G08880 | No description available. | A09 | + | View |
BR06G16320 | No description available. | A06 | + | View |
BR05G24530 | No description available. | A05 | - | View |
BR09G07900 | No description available. | A09 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G09090 | No description available. | Bvchr6.sca003 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL02G13560 | No description available. | Chr2 | - | View |
CL10G20060 | No description available. | Chr10 | - | View |
CL11G08560 | No description available. | Chr11 | + | View |
CL05G16730 | No description available. | Chr5 | - | View |
CL01G02970 | No description available. | Chr1 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00005G05970 | No description available. | CM3.5_scaffold00005 | + | View |
CM01596G04500 | No description available. | CM3.5_scaffold01596 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00026G02700 | No description available. | supercontig_26 | - | View |
CP00003G01470 | No description available. | supercontig_3 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G30820 | No description available. | scaffold_3 | - | View |
CRU_007G00160 | No description available. | scaffold_7 | - | View |
CRU_002G21630 | No description available. | scaffold_2 | + | View |
CRU_005G15790 | No description available. | scaffold_5 | + | View |
CRU_003G18080 | No description available. | scaffold_3 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00062G00620 | No description available. | scaffold00062 | - | View |
CS00002G06010 | No description available. | scaffold00002 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G13780 | No description available. | scaffold_6 | + | View |
EG0010G06030 | No description available. | scaffold_10 | - | View |
EG0005G18310 | No description available. | scaffold_5 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G38000 | Calcium-dependent protein kinase 29 (similar to) | LG2 | - | View |
FV2G12340 | Calcium-dependent protein kinase 4 (CDPK 4) (putative) | LG2 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM14G00320 | No description available. | Gm14 | - | View |
GM16G32390 | No description available. | Gm16 | + | View |
GM03G24200 | No description available. | Gm03 | + | View |
GM10G38463 | No description available. | Gm10 | - | View |
GM18G43160 | No description available. | Gm18 | - | View |
GM02G44720 | No description available. | Gm02 | - | View |
GM14G40080 | No description available. | Gm14 | - | View |
GM14G04010 | No description available. | Gm14 | + | View |
GM17G38040 | No description available. | Gm17 | + | View |
GM07G18310 | No description available. | Gm07 | - | View |
GM10G10501 | No description available. | Gm10 | + | View |
GM02G48160 | No description available. | Gm02 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G21030 | No description available. | Chr06 | - | View |
GR10G00130 | No description available. | Chr10 | - | View |
GR12G11460 | No description available. | Chr12 | - | View |
GR09G19150 | No description available. | Chr09 | - | View |
GR13G06440 | No description available. | Chr13 | + | View |
GR12G13890 | No description available. | Chr12 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD12G014430 | No description available. | 12 | - | View |
MD01G018630 | No description available. | 1 | + | View |
MD04G012550 | No description available. | 4 | - | View |
MD02G024960 | No description available. | 2 | - | View |
MD14G008110 | No description available. | 14 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME11425G00530 | No description available. | scaffold11425 | - | View |
ME02943G00580 | No description available. | scaffold02943 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G052530 | calmodulin-domain kinase CDPK protein | chr1 | - | View |
MT1G026075 | calcium-dependent kinase family protein | chr1 | + | View |
MT1G101630 | calcium-dependent kinase | chr1 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G58520 | CAMK_CAMK_like.16 - CAMK includes calcium%2Fcalmodulin depedent protein kinases, expressed | 2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G28550 | No description available. | scaffold_6 | - | View |
PPE_008G19770 | No description available. | scaffold_8 | + | View |
PPE_001G36840 | No description available. | scaffold_1 | - | View |
PPE_002G27620 | No description available. | scaffold_2 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G20730 | No description available. | Chr04 | + | View |
PT15G13690 | No description available. | Chr15 | - | View |
PT09G16860 | No description available. | Chr09 | + | View |
PT03G12080 | No description available. | Chr03 | + | View |
PT02G01700 | No description available. | Chr02 | - | View |
PT06G10130 | No description available. | Chr06 | - | View |
PT05G24500 | No description available. | Chr05 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30147G00740 | No description available. | 30147 | - | View |
RC30170G06020 | No description available. | 30170 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G081910 | Calcium-dependent protein kinase (AHRD V1 **** Q8RW36_SOLLC)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinase | ch04 | + | View |
SL01G112250 | Calcium-dependent protein kinase 3 (AHRD V1 **** Q7Y050_CAPAN)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinase | ch01 | + | View |
SL01G096350 | Calcium dependent protein kinase-like protein (AHRD V1 **** Q9FIM9_ARATH)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinase | ch01 | - | View |
SL01G008440 | Calcium-dependent protein kinase 8 (AHRD V1 **** Q6KC54_NICPL)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinase | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G008910 | Calcium-dependent protein kinase 8 (AHRD V1 **** Q6KC54_NICPL); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase | chr01 | + | View |
ST04G035300 | Calcium-dependent protein kinase 1 (AHRD V1 **** D1MEN6_PANGI); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase | chr04 | + | View |
ST01G049780 | Calcium-dependent protein kinase 10 (AHRD V1 **** E3VJP9_TOBAC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase Calcium-dependent protein kinase 5 | chr01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G04880 | No description available. | scaffold_8 | + | View |
TC0002G14080 | No description available. | scaffold_2 | + | View |
TC0005G01500 | No description available. | scaffold_5 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G11670 | similar to AT3G50530|CRK (CDPK-related kinase) | ch5-1 | - | View |
TP3G18420 | similar to AT3G20410|CPK9 (calmodulin-domain protein kinase 9) | ch3-1 | + | View |
TP7G37490 | similar to AT4G38230|CPK26 | ch7-6 | + | View |
TP5G31150 | similar to AT1G76040|CPK29 | ch5-7 | + | View |
TP3G17180 | similar to AT3G19100|calcium-dependent protein kinase, putative / CDPK, putative | ch3-1 | + | View |
TP7G33110 | similar to AT4G35310|CPK5 (calmodulin-domain protein kinase 5) | ch7-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G01150 | name=GSVIVG01008747001; | chr18 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM04G29220 | No description available. | 4 | + | View |
ZM04G24400 | CDPK protein | 4 | - | View |
ZM07G27360 | LOC100280531 | 7 | - | View |