Anchorpoints

Gene id
AL2G24920
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL7G00130No description available.scaffold_7-View
AL3G20650No description available.scaffold_3+View
AL5G20030No description available.scaffold_5+View
AL5G18500No description available.scaffold_5-View
AL1G12950No description available.scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G49370Calcium-dependent protein kinase (CDPK) family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT5G24430.1); Has 120826 Blast hits to 119042 proteins in 3470 species: Archae - 178; Bacteria - 14958; Metazoa - 45068; Fungi - 12844; Plants - 26097; Viruses - 535; Other Eukaryotes - 21146 (source: NCBI BLink). Calcium-dependent protein kinase (CDPK) family protein3-View
AT3G50530CDPK-related kinase CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1). CDPK-related kinase3+View
AT3G19100Protein kinase superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase (CDPK) family protein (TAIR:AT1G49580.1); Has 120241 Blast hits to 118384 proteins in 3609 species: Archae - 140; Bacteria - 14458; Metazoa - 44881; Fungi - 12679; Plants - 26503; Viruses - 512; Other Eukaryotes - 21068 (source: NCBI BLink). Protein kinase superfamily protein3+View
AT1G76040member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 29 (CPK29); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 21 (TAIR:AT4G04720.1); Has 142530 Blast hits to 132137 proteins in 3984 species: Archae - 133; Bacteria - 14530; Metazoa - 52901; Fungi - 18639; Plants - 31038; Viruses - 504; Other Eukaryotes - 24785 (source: NCBI BLink). calcium-dependent protein kinase 291+View
AT2G17890calcium-dependent protein kinase 16 (CPK16); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 18 (TAIR:AT4G36070.1); Has 126765 Blast hits to 124478 proteins in 3942 species: Archae - 195; Bacteria - 14619; Metazoa - 47448; Fungi - 14527; Plants - 27603; Viruses - 509; Other Eukaryotes - 21864 (source: NCBI BLink). calcium-dependent protein kinase 16 Encodes a member of Calcium Dependent Protein Kinase. Protein is N-myristoylated. Localizes to the plasma membrane. Localizes to the chloroplast when the myristoylation motif is mutated.2-View
AT4G38230calcium-dependent protein kinase 26 (CPK26); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase family protein (TAIR:AT2G17290.1). calcium-dependent protein kinase 26 member of Calcium Dependent Protein Kinase4-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00024G03000No description available.scaffold00024-View
ATR_00044G00740No description available.scaffold00044+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G35790No description available.A03+View
BR01G02970No description available.A01-View
BR07G31220No description available.A07+View
BR09G08880No description available.A09+View
BR06G16320No description available.A06+View
BR05G24530No description available.A05-View
BR09G07900No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G09090No description available.Bvchr6.sca003-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G13560No description available.Chr2-View
CL10G20060No description available.Chr10-View
CL11G08560No description available.Chr11+View
CL05G16730No description available.Chr5-View
CL01G02970No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00005G05970No description available.CM3.5_scaffold00005+View
CM01596G04500No description available.CM3.5_scaffold01596-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G02700No description available.supercontig_26-View
CP00003G01470No description available.supercontig_3-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G30820No description available.scaffold_3-View
CRU_007G00160No description available.scaffold_7-View
CRU_002G21630No description available.scaffold_2+View
CRU_005G15790No description available.scaffold_5+View
CRU_003G18080No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00062G00620No description available.scaffold00062-View
CS00002G06010No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G13780No description available.scaffold_6+View
EG0010G06030No description available.scaffold_10-View
EG0005G18310No description available.scaffold_5-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G38000Calcium-dependent protein kinase 29 (similar to)LG2-View
FV2G12340Calcium-dependent protein kinase 4 (CDPK 4) (putative)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G00320No description available.Gm14-View
GM16G32390No description available.Gm16+View
GM03G24200No description available.Gm03+View
GM10G38463No description available.Gm10-View
GM18G43160No description available.Gm18-View
GM02G44720No description available.Gm02-View
GM14G40080No description available.Gm14-View
GM14G04010No description available.Gm14+View
GM17G38040No description available.Gm17+View
GM07G18310No description available.Gm07-View
GM10G10501No description available.Gm10+View
GM02G48160No description available.Gm02+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G21030No description available.Chr06-View
GR10G00130No description available.Chr10-View
GR12G11460No description available.Chr12-View
GR09G19150No description available.Chr09-View
GR13G06440No description available.Chr13+View
GR12G13890No description available.Chr12-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G014430No description available.12-View
MD01G018630No description available.1+View
MD04G012550No description available.4-View
MD02G024960No description available.2-View
MD14G008110No description available.14+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11425G00530No description available.scaffold11425-View
ME02943G00580No description available.scaffold02943-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G052530calmodulin-domain kinase CDPK proteinchr1-View
MT1G026075calcium-dependent kinase family proteinchr1+View
MT1G101630calcium-dependent kinasechr1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G58520CAMK_CAMK_like.16 - CAMK includes calcium%2Fcalmodulin depedent protein kinases, expressed2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G28550No description available.scaffold_6-View
PPE_008G19770No description available.scaffold_8+View
PPE_001G36840No description available.scaffold_1-View
PPE_002G27620No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G20730No description available.Chr04+View
PT15G13690No description available.Chr15-View
PT09G16860No description available.Chr09+View
PT03G12080No description available.Chr03+View
PT02G01700No description available.Chr02-View
PT06G10130No description available.Chr06-View
PT05G24500No description available.Chr05+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G00740No description available.30147-View
RC30170G06020No description available.30170-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G081910Calcium-dependent protein kinase (AHRD V1 **** Q8RW36_SOLLC)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinasech04+View
SL01G112250Calcium-dependent protein kinase 3 (AHRD V1 **** Q7Y050_CAPAN)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinasech01+View
SL01G096350Calcium dependent protein kinase-like protein (AHRD V1 **** Q9FIM9_ARATH)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinasech01-View
SL01G008440Calcium-dependent protein kinase 8 (AHRD V1 **** Q6KC54_NICPL)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinasech01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G008910Calcium-dependent protein kinase 8 (AHRD V1 **** Q6KC54_NICPL); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr01+View
ST04G035300Calcium-dependent protein kinase 1 (AHRD V1 **** D1MEN6_PANGI); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr04+View
ST01G049780Calcium-dependent protein kinase 10 (AHRD V1 **** E3VJP9_TOBAC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase Calcium-dependent protein kinase 5chr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G04880No description available.scaffold_8+View
TC0002G14080No description available.scaffold_2+View
TC0005G01500No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G11670similar to AT3G50530|CRK (CDPK-related kinase)ch5-1-View
TP3G18420similar to AT3G20410|CPK9 (calmodulin-domain protein kinase 9)ch3-1+View
TP7G37490similar to AT4G38230|CPK26ch7-6+View
TP5G31150similar to AT1G76040|CPK29ch5-7+View
TP3G17180similar to AT3G19100|calcium-dependent protein kinase, putative / CDPK, putativech3-1+View
TP7G33110similar to AT4G35310|CPK5 (calmodulin-domain protein kinase 5)ch7-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G01150name=GSVIVG01008747001;chr18-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G29220No description available.4+View
ZM04G24400CDPK protein4-View
ZM07G27360LOC1002805317-View


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Gene id
Species
Description
Chromosome
Strand