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WorkbenchAnchorpoints
- Gene id
- AL2G20260
- Organism
- Arabidopsis lyrata
Paralogs (intra-species colinear regions)
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G71450 | Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G33760.1); Has 5936 Blast hits to 5716 proteins in 247 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5928; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | 1 | + | View |
| AT1G22810 | Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G71520.1); Has 4908 Blast hits to 4906 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4903; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein | 1 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR07G27820 | No description available. | A07 | + | View |
| BR02G20960 | No description available. | A02 | - | View |
| BR07G09260 | No description available. | A07 | + | View |
| BR09G31570 | No description available. | A09 | + | View |
| BR07G21650 | No description available. | A07 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G21410 | No description available. | scaffold_1 | - | View |
| CRU_002G17250 | No description available. | scaffold_2 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR09G26620 | No description available. | Chr09 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT13G10030 | No description available. | Chr13 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G20300 | similar to AT1G22810|AP2 domain-containing transcription factor, putative | ch1-1 | - | View |
| TP1G29080 | similar to AT1G33760|AP2 domain-containing transcription factor, putative | ch1-1 | + | View |
| TP5G26610 | similar to AT1G71450|AP2 domain-containing transcription factor, putative | ch5-6 | + | View |