Anchorpoints

Gene id
AL2G17850
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G69600zinc finger homeodomain 1 (ZFHD1); CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 26 (TAIR:AT5G60480.1); Has 480 Blast hits to 471 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 480; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). zinc finger homeodomain 1 Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G19910No description available.A02+View
BR07G26380No description available.A07+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G02700No description available.Bvchr6.sca028+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G13140No description available.Chr10-View
CL06G16780No description available.Chr6-View
CL05G25260No description available.Chr5+View
CL09G18710No description available.Chr9+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G04190No description available.CM3.5_scaffold00016-View
CM00011G08200No description available.CM3.5_scaffold00011+View
CM00030G00930No description available.CM3.5_scaffold00030+View
CM00051G00280No description available.CM3.5_scaffold00051-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G15310No description available.scaffold_2+View
CRU_005G06870No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00003G04300No description available.scaffold00003-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G20580No description available.scaffold_11+View
EG0009G16300No description available.scaffold_9+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G44540ZF-HD homeobox protein At5g65410 (probable)LG6+View
FV0G05550ZF-HD homeobox protein At4g24660 (AtHB-22) (similar to)scf0513158+View
FV5G13300ZF-HD homeobox protein At4g24660 (AtHB-22) (similar to)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G10830No description available.Gm17+View
GM20G04880No description available.Gm20+View
GM02G11950No description available.Gm02-View
GM05G01060No description available.Gm05-View
GM07G35760No description available.Gm07+View
GM04G33640No description available.Gm04-View
GM13G05380No description available.Gm13+View
GM19G02610No description available.Gm19+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G08550No description available.Chr13-View
GR12G05430No description available.Chr12+View
GR07G03730No description available.Chr07+View
GR06G01720No description available.Chr06+View
GR05G14140No description available.Chr05-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G004730No description available.13+View
MD09G003650No description available.9+View
MD16G003850No description available.16+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11581G01500No description available.scaffold11581+View
ME03834G00050No description available.scaffold03834+View
ME12794G02160No description available.scaffold12794+View
ME11495G00260No description available.scaffold11495+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G010300homeobox domain C ZF-HD class proteinchr7-View
MT6G012220ZF-HD protein dimerization region proteinchr6+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS09G24810ZF-HD protein dimerisation region containing protein, expressed9+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G28600No description available.scaffold_1-View
PPE_003G24670No description available.scaffold_3+View
PPE_005G19810No description available.scaffold_5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G16940No description available.Chr10+View
PT17G08270No description available.Chr17+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29813G00370No description available.29813-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G007580Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK19_CUCSA)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch05-View
SL03G116070Zinc finger-homeodomain protein 3 (Fragment) (AHRD V1 **-- B0LK14_SARHE)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch03-View
SL02G067310Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK19_CUCSA)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch02+View
SL02G087970Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G034890Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr02-View
ST05G010300Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr05+View
ST02G013170Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK19_CUCSA); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G08560No description available.scaffold_4+View
TC0002G34470No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G24720similar to AT1G69600|ZFHD1 (ZINC FINGER HOMEODOMAIN 1)ch5-6+View
TP2G17540similar to AT3G28917|MIF2 (MINI ZINC FINGER 2)ch2-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G02170name=GSVIVG01011413001;chr14+View
VV01G12070name=GSVIVG01019981001;chr1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G41410zinc finger homeodomain protein 13-View


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Gene id
Species
Description
Chromosome
Strand