Anchorpoints

Gene id
AL2G16740
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G27700No description available.scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G25470AP2 domain-containing transcription factor family protein AP2 domain-containing transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Pathogenesis-related genes transcriptional activator PTI6 (InterPro:IPR017392), DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G68550.2); Has 2801 Blast hits to 2801 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2796; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.1-View
AT1G68550encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2); Has 4835 Blast hits to 4832 proteins in 228 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 3; Plants - 4809; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). Integrase-type DNA-binding superfamily protein1-View
AT1G12890encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G18560.1); Has 5243 Blast hits to 5226 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5234; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G29540No description available.A09-View
BR07G25570No description available.A07-View
BR02G19220No description available.A02-View
BR07G22730No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G02770No description available.Chr8+View
CL05G23830No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G05770No description available.CM3.5_scaffold00016+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G01750No description available.supercontig_1-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G12050No description available.scaffold_1+View
CRU_002G14170No description available.scaffold_2-View
CRU_001G24020No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00019G00340No description available.scaffold00019-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G17720No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G01750Ethylene-responsive transcription factor ERF118 (probable)scf0513158-View
FV5G36260Ethylene-responsive transcription factor ERF117 (probable)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G42130No description available.Gm10-View
GM08G04550No description available.Gm08+View
GM01G20383No description available.Gm01+View
GM07G10116No description available.Gm07+View
GM20G24920No description available.Gm20+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G07610No description available.Chr13-View
GR08G18330No description available.Chr08-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G018380No description available.chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G002790No description available.13-View
MD06G017990No description available.6+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06446G00180No description available.scaffold06446-View
ME08359G00130No description available.scaffold08359-View
ME06005G00070No description available.scaffold06005-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G110970ethylene-responsive transcription factor ERF118-like proteinchr1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G22320No description available.scaffold_5+View
PPE_001G31970No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G12010No description available.Chr08+View
PT10G12560No description available.Chr10-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC27524G00140No description available.27524-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G119580Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6THY5_MAIZE)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch03-View
SL05G009450Ethylene responsive transcription factor 2a (AHRD V1 *-*- C0J9I7_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G007950Ethylene responsive transcription factor 2a (AHRD V1 *-*- C0J9I7_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr05+View
ST03G033100Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6THY5_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G35370No description available.scaffold_2-View
TC0003G03290No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G22740similar to AT1G25470|AP2 domain-containing transcription factor, putativech1-1+View
TP5G23630similar to AT1G68550|AP2 domain-containing transcription factor, putativech5-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G07810name=GSVIVG01011902001;chr1+View


Download

Gene id
Species
Description
Chromosome
Strand