Anchorpoints

Gene id
AL2G14300
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G66730Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair. DNA LIGASE 6 (LIG6); FUNCTIONS IN: DNA binding, DNA ligase (ATP) activity, ATP binding; INVOLVED IN: DNA repair, seed germination, DNA recombination, DNA replication; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), DNA ligase, N-terminal (InterPro:IPR012308), DNA repair metallo-beta-lactamase (InterPro:IPR011084), ATP dependent DNA ligase, central (InterPro:IPR012310), ATP dependent DNA ligase, C-terminal (InterPro:IPR012309), ATP-dependent DNA ligase (InterPro:IPR000977), ATP-dependent DNA ligase, conserved site (InterPro:IPR016059); BEST Arabidopsis thaliana protein match is: DNA ligase 1 (TAIR:AT1G08130.1); Has 4468 Blast hits to 4373 proteins in 907 species: Archae - 366; Bacteria - 1648; Metazoa - 644; Fungi - 681; Plants - 268; Viruses - 157; Other Eukaryotes - 704 (source: NCBI BLink). DNA LIGASE 61+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G24240No description available.A07+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00170G00080No description available.supercontig_170+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G12140No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00042G00530No description available.scaffold00042+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G23280No description available.scaffold_6-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04043G00490No description available.scaffold04043+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G12380No description available.scaffold_3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G09420No description available.Chr04+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29586G00080No description available.29586+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G029700DNA ligase (AHRD V1 ***- B9SPY8_RICCO); contains Interpro domain(s) IPR000977 ATP-dependent DNA ligasechr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G13150No description available.scaffold_4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G07530name=GSVIVG01030942001;chr14+View


Download

Gene id
Species
Description
Chromosome
Strand