Anchorpoints

Gene id
AL2G13340
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL1G15760No description available.scaffold_1+View
AL5G00570No description available.scaffold_5-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G66350RGA-like 1 (RGL1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2708 Blast hits to 2634 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2704; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development. RGA-like 11+View
AT1G14920GIBBERELLIC ACID INSENSITIVE (GAI); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT2G01570.1); Has 2718 Blast hits to 2657 proteins in 311 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 2714; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. GRAS family transcription factor family protein1+View
AT2G01570Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development. GRAS family transcription factor family protein REPRESSOR OF GA1-3 1 (RGA1); CONTAINS InterPro DOMAIN/s: Transcriptional factor DELLA, N-terminal (InterPro:IPR021914), Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor family protein (TAIR:AT1G14920.1); Has 2724 Blast hits to 2666 proteins in 317 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 4; Plants - 2709; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G17910No description available.A02+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G12840No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00042G00180No description available.CM3.5_scaffold00042+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00116G00430No description available.supercontig_116-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G14070No description available.scaffold_1+View
CRU_002G11600No description available.scaffold_2+View
CRU_005G00480No description available.scaffold_5-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00197G00370No description available.scaffold00197+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G13890No description available.scaffold_10-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G33720No description available.Gm11+View
GM18G04500No description available.Gm18-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G024860No description available.9+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G12520No description available.Chr17+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G011260GAI-like protein 1 (Fragment) (AHRD V1 ***- A1YWN9_9ROSI)%3B contains Interpro domain(s) IPR005202 GRAS transcription factor DELLA protein GAIch11-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G008520GAI-like protein 1 (Fragment) (AHRD V1 ***- A1YWN9_9ROSI); contains Interpro domain(s) IPR005202 GRAS transcription factorchr11-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G12200No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G21380similar to AT1G66350|RGL1 (RGA-LIKE 1)ch5-5+View
TP2G13010similar to AT2G01570|RGA1 (REPRESSOR OF GA1-3 1)ch2-4-View


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Gene id
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Description
Chromosome
Strand