PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: AL2G11890
Organism: Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G65610	Six-hairpin glycosidases superfamily protein KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).	1	-	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR02G17600	No description available.	A02	-	View

Beta vulgaris

Gene id	Description	Chromosome	Strand	Multiplicon
BV4G14560	No description available.	Bvchr4.sca001	+	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_002G10700	No description available.	scaffold_2	-	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00008G01160	No description available.	scaffold00008	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT10G17730	No description available.	Chr10	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP5G20520	similar to AT1G65610\|KOR2	ch5-5	-	View